ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.15.1

Subclass Accession number: 9189
Subclass: 8.15.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 55.3 +/- 2.8
Average RMSD (Å) : 0.433 +/- 0.153

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	hFXcRFDYKDXX
(φψ)-conformation:	aalbpbpaapaa

Pattern:	[T]	[FL]	[IL]	[FL]	x	[CS]	[AI]	[PT]	[CS]	[N]	[IV]	[I]	[C]	[S]	[IV]	[IV]	[F]	x	[KN]	[R]	[F]	[D]	[Y]	[K]	[D]	[EPQ]	x	[F]	[L]	[KNR]	[L]	[LM]	[DE]	x	[FL]	x	[EQ]	[NS]
Conservation:	0.691	-0.645	-0.421	-0.742	-0.734	-0.428	-1.252	-0.641	-0.428	1.250	-0.144	0.133	2.924	0.133	-0.132	-0.144	1.250	-0.637	-0.550	0.691	1.250	1.250	1.808	0.691	1.250	-1.045	-1.480	1.250	0.133	-0.859	0.133	-0.256	-0.023	-1.790	-0.742	-1.232	-0.140	-0.368

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1nr6_A_167	1nr6	A	167	204	TFILGCAPCNVICSVIFHNRFDYKDEEFLKLMESLHEN	HHHHHHHHHHHHHHHHHS----TT-HHHHHHHHHHHHH	aaaaaaaaaaaaaaaaavbbbxaaxaaaaaaaaaaaaa
1og5_A_167	1og5	A	167	204	TFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNEN	HHHHHHHHHHHHHHHHHS----TT-HHHHHHHHHHHHH	aaaaaaaaaaaaaaaaavbxbxaapaaaaaaaaaaaaa
1po5_A_168	1po5	A	168	205	TLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS	HHHHHHHHHHHHHHHHHSS---TT-HHHHHHHHHHHHH	aaaaaaaaaaaaaaaaavbxxpaaxaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1nr6_A_167	1nr6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	I - 178
1nr6_A_167	1nr6	A	DIF2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID	L - 201
1nr6_A_167	1nr6	A	DIF2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID	N - 204
1nr6_A_167	1nr6	A	DIF2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID	V - 205
1og5_A_167	1og5	A	HECHEME C	I - 178
1og5_A_167	1og5	A	SWFS-WARFARIN	L - 208
1po5_A_168	1po5	A	HEMPROTOPORPHYRIN IX CONTAINING FE	I - 179

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1og5_A_167	1og5	A	AC3SWF BINDING SITE FOR CHAIN A	L - 208

Clusters included in this Subclass