Information on SUBCLASS 9.5.1 |
Subclass Accession number: 9199
Subclass: 9.5.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 52.6 +/- 18.6 Average RMSD (Å) : 0.275 +/- 0.096 Consensus geometry
|
Consensus Sequence: | XpGhccYpXhpLh |
(φψ)-conformation: | aalaplpllppaa |
Pattern: | [KR] | [CQ] | [E] | [L] | [AC] | [AKR] | [AKN] | [LM] | [KV] | [ARS] | x | [G] | [LM] | [DN] | [GN] | [FY] | x | x | x | [ST] | [L] | [AGP] | [N] | [W] | [V] | [C] | [ALMT] | [AS] | [EFK] | [FHWY] | [E] | [S] |
Conservation: | 0.059 | -0.211 | 0.702 | 0.272 | -0.237 | -0.721 | -1.060 | -0.067 | -0.756 | -0.885 | -1.072 | 1.132 | 0.061 | 0.132 | -0.043 | 0.731 | -1.018 | -0.352 | -1.085 | -0.270 | 0.272 | -0.857 | 1.132 | 3.281 | 0.272 | 2.421 | -1.072 | -0.303 | -1.108 | -0.320 | 0.702 | 0.272 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jug_*_5 | 1jug | - | 5 | 36 | KQELCKNLVAQGMNGYQHITLPNWVCTAFHES | HHHHHHHHHHTT-TTBTTB-HHHHHHHHHHHH | aaaaaaaaaaavaxvxllxxaaaaaaaaaaaa |
1lmq_*_5 | 1lmq | - | 5 | 36 | RCELARALKASGMDGYAGNSLPNWVCLSKWES | HHHHHHHHHHTT-TTBTTB-HHHHHHHHHHHH | aaaaaaaaaaavaxvxlvbxaaaaaaaaaaaa |
1qqy_A_5 | 1qqy | A | 5 | 36 | KCELARKLKSMGMDGFHGYSLANWVCMAEYES | HHHHHHHHHHTT-TTBTTB-HHHHHHHHHHHH | aaaaaaaaaaavaxvxvvxxaaaaaaaaaaaa |
3lzt_*_5 | 3lzt | - | 5 | 36 | RCELAAAMKRHGLDNYRGYSLGNWVCAAKFES | HHHHHHHHHHTT-TTBTTB-HHHHHHHHHHHH | aaaaaaaaaaavaxvplvbpaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lmq_*_5 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | E - 35 |
3lzt_*_5 | 3lzt | * | ACTACETATE ION | G - 16 |
3lzt_*_5 | 3lzt | * | ACTACETATE ION | Y - 20 |
3lzt_*_5 | 3lzt | * | ACTACETATE ION | R - 21 |
3lzt_*_5 | 3lzt | * | ACTACETATE ION | E - 35 |
Clusters included in this Subclass |
CLUSTER: HH.9.18 |