Information on SUBCLASS 9.16.1 |
Subclass Accession number: 9210
Subclass: 9.16.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 31.0 +/- 21.7 Average RMSD (Å) : 0.567 +/- 0.058 Consensus geometry
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Consensus Sequence: | ppXXphpphhPXX |
(φψ)-conformation: | aalbpaaaabwaa |
Pattern: | [AS] | [ST] | [IL] | [IV] | [KR] | [E] | x | [AL] | [QR] | [HNY] | [DGQ] | [EG] | [DS] | [CV] | [EST] | [DEH] | [FL] | [LV] | [P] | [EP] | [ENP] | [V] | x | x | [AY] | [IL] | x | [AQ] | [KQ] |
Conservation: | 0.027 | 0.150 | 0.426 | 0.750 | 0.777 | 1.863 | -1.297 | -0.697 | 0.415 | 0.028 | -0.972 | -0.405 | -0.072 | -0.080 | -0.722 | -0.139 | 0.195 | 0.090 | 3.363 | 0.000 | -0.889 | 1.112 | -1.473 | -1.389 | -0.688 | 0.388 | -0.889 | -0.288 | 0.415 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1k4m_A_181 | 1k4m | A | 181 | 209 | ATIIRERLQNGESCEDLLPEPVLTYINQQ | HHHHHHHHHTT---TTTS-HHHHHHHHHH | aaaaaaaaaavbxaaaabwaaaaaaaaaa |
1o6b_A_129 | 1o6b | A | 129 | 157 | SSIVKEVARYDGSVSEFVPPEVELALQQK | HHHHHHHHHTT---TTTS-HHHHHHHHHH | aaaaaaaaaavxxaaaabwaaaaaaaaaa |
1qjc_A_129 | 1qjc | A | 129 | 157 | SSLVKEVARHQGDVTHFLPENVHQALMAK | HHHHHHHHHTT---GGGS-HHHHHHHHHH | aaaaaaaaaavbxaaaabxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1k4m_A_181 | 1k4m | A | CITCITRIC ACID | A - 181 |
1k4m_A_181 | 1k4m | A | CITCITRIC ACID | T - 182 |
1k4m_A_181 | 1k4m | A | CITCITRIC ACID | I - 183 |
1k4m_A_181 | 1k4m | A | CITCITRIC ACID | R - 185 |
1o6b_A_129 | 1o6b | A | PO4PHOSPHATE ION | S - 129 |
1o6b_A_129 | 1o6b | A | ADPADENOSINE-5'-DIPHOSPHATE | S - 129 |
1o6b_A_129 | 1o6b | A | PO4PHOSPHATE ION | S - 130 |
1o6b_A_129 | 1o6b | A | MGMAGNESIUM ION | A - 136 |
1o6b_A_129 | 1o6b | A | MGMAGNESIUM ION | D - 139 |
1o6b_A_129 | 1o6b | A | MGMAGNESIUM ION | G - 140 |
1o6b_A_129 | 1o6b | A | MGMAGNESIUM ION | Q - 155 |
Clusters included in this Subclass |
CLUSTER: HH.9.42 |