ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.22.1

Subclass Accession number: 9216
Subclass: 9.22.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 2

Average sequence ID (%) : 48.4 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 45-90

rho (°): 315-360

Consensus Sequence:	XXcNpGCpGGhhX
(φψ)-conformation:	aagpaeaae_baa

Pattern:	[E]	[Q]	[NQ]	[L]	[V]	[D]	[C]	[AS]	[QR]	[NP]	[FQ]	[GN]	[N]	[HQ]	[G]	[C]	[NQ]	[G]	[G]	[FL]	[MP]	[AS]	[QR]	[A]	[F]	[EQ]	[Y]	[IV]	[KR]	[EY]	[N]
Conservation:	0.368	0.368	-0.759	-0.133	-0.133	0.868	2.371	-0.884	-0.634	-1.010	-1.510	-0.634	0.868	-0.509	0.868	2.371	-0.759	0.868	0.868	-0.884	-1.135	-0.884	-0.634	-0.133	0.868	-0.384	1.369	-0.384	-0.384	-1.135	0.868

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1fh0_A_50	1fh0	A	50	80	EQNLVDCSRPQGNQGCNGGFMARAFQYVKEN	HHHHHHH-GGGT--GGG---HHHHHHHHHHH	aaaaaaaaaaagxaeaaebbaaaaaaaaaaa
8pch_A_50	8pch	A	50	80	EQQLVDCAQNFNNHGCQGGLPSQAFEYIRYN	HHHHHHHGGGGT--GGG---HHHHHHHHHHH	aaaaaaaaaaavbaeaaeebaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1fh0_A_50	1fh0	A	ODS4-METHYLPIPERAZIN-1-YL CARBONYL GROUP	G - 61
1fh0_A_50	1fh0	A	ODS4-METHYLPIPERAZIN-1-YL CARBONYL GROUP	N - 62
1fh0_A_50	1fh0	A	ODS4-METHYLPIPERAZIN-1-YL CARBONYL GROUP	Q - 63
1fh0_A_50	1fh0	A	NFP3-AMINO-5-PHENYLPENTANE	C - 65
1fh0_A_50	1fh0	A	ODS4-METHYLPIPERAZIN-1-YL CARBONYL GROUP	N - 66
1fh0_A_50	1fh0	A	NFP3-AMINO-5-PHENYLPENTANE	N - 66
1fh0_A_50	1fh0	A	ODS4-METHYLPIPERAZIN-1-YL CARBONYL GROUP	G - 67
1fh0_A_50	1fh0	A	NFP3-AMINO-5-PHENYLPENTANE	G - 67
1fh0_A_50	1fh0	A	ODS4-METHYLPIPERAZIN-1-YL CARBONYL GROUP	G - 68
1fh0_A_50	1fh0	A	NFP3-AMINO-5-PHENYLPENTANE	G - 68
1fh0_A_50	1fh0	A	ODS4-METHYLPIPERAZIN-1-YL CARBONYL GROUP	F - 69
8pch_A_50	8pch	A	NAGN-ACETYL-D-GLUCOSAMINE	N - 59

Clusters included in this Subclass