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Information on SUBCLASS 10.10.1
Subclass Accession number: 9226
Subclass: 10.10.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 56.0 +/- 0.2
Average RMSD (Å) : 0.267 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XpGMPRRYXDYPXX
(φψ)-conformation: aalppplbabbwaa
Pattern: [Q][H][F][L][G]x[QS][G][M][P][R][R][Y]x[D][Y][P]x[AE][FY][AT]x[W][N]x[IV][S][S][ILM][G][AS][FY][IL][S][FL][AT][AS][FV][LM][FL][FM][ILV][FG][IV][IV][FW][EY][AT][FL][AFT]
Conservation:0.5221.9020.9820.0620.982-1.159-0.7050.9820.5221.4420.5220.5221.442-1.3010.9821.4421.442-1.318-0.9620.391-0.756-1.3183.2810.982-1.420-0.1570.0620.062-0.6020.982-0.6200.395-0.3760.062-0.563-0.756-0.620-0.790-0.301-0.563-0.472-0.551-1.063-0.157-0.1570.301-0.785-0.705-0.665-1.420
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ar1_A_4621ar1   A463512QHFLGRQGMPRRYIDYPVEFAYWNNISSIGAYISFASFLFFIGIVFYTLFHHHHHHTT-BSS-S---GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHaaaaaaavxxxvbabbwaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
1m56_A_4701m56   A471520QHFLGRQGMPRRYIDYPEAFATWNFVSSLGAFLSFASFLFFLGVIFYTLTHHHHHHTT-BTT-S---GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHaaaaaaavxxxvxabbpaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
2occ_A_4282occ   A428477QHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFAHHHHHHTT-BTT-SS--GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHaaaaaaavxxxvbabbwaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE P - 462
1ar1_A_4621ar1   A     HEAHEME-A Q - 463
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE H - 464
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE F - 465
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE R - 468
1ar1_A_4621ar1   A     HEAHEME-A P - 472
1ar1_A_4621ar1   A     HEAHEME-A R - 473
1ar1_A_4621ar1   A     CACALCIUM ION R - 473
1ar1_A_4621ar1   A     HEAHEME-A R - 474
1ar1_A_4621ar1   A     MGMAGNESIUM ION R - 474
1ar1_A_4621ar1   A     CACALCIUM ION R - 474
1ar1_A_4621ar1   A     HEAHEME-A Y - 475
1ar1_A_4621ar1   A     CUCOPPER (II) ION Y - 475
1ar1_A_4621ar1   A     HEAHEME-A I - 476
1ar1_A_4621ar1   A     CACALCIUM ION I - 476
1ar1_A_4621ar1   A     CACALCIUM ION D - 477
1ar1_A_4621ar1   A     CACALCIUM ION Y - 478
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE Y - 484
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE W - 485
1ar1_A_4621ar1   A     HEAHEME-A S - 489
1ar1_A_4621ar1   A     HEAHEME-A A - 493
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE Y - 494
1ar1_A_4621ar1   A     HEAHEME-A S - 496
1ar1_A_4621ar1   A     HEAHEME-A F - 497
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE F - 497
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE A - 498
1ar1_A_4621ar1   A     HEAHEME-A S - 499
1ar1_A_4621ar1   A     HEAHEME-A F - 500
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE L - 501
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE F - 502
1ar1_A_4621ar1   A     HEAHEME-A F - 503
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE F - 503
1ar1_A_4621ar1   A     HEAHEME-A I - 504
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE I - 504
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE G - 505
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE I - 506
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE V - 507
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE F - 508
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE Y - 509
1ar1_A_4621ar1   A     LDALAURYL DIMETHYLAMINE-N-OXIDE L - 511
1m56_A_4701m56   A     CACALCIUM ION Q - 471
1m56_A_4701m56   A     HEAHEME-A Q - 471
1m56_A_4701m56   A     HEAHEME-A M - 479
1m56_A_4701m56   A     HEAHEME-A P - 480
1m56_A_4701m56   A     CACALCIUM ION R - 481
1m56_A_4701m56   A     HEAHEME-A R - 481
1m56_A_4701m56   A     CACALCIUM ION R - 482
1m56_A_4701m56   A     HEAHEME-A R - 482
1m56_A_4701m56   A     CUCOPPER (II) ION Y - 483
1m56_A_4701m56   A     HEAHEME-A Y - 483
1m56_A_4701m56   A     CACALCIUM ION I - 484
1m56_A_4701m56   A     CACALCIUM ION D - 485
1m56_A_4701m56   A     CACALCIUM ION Y - 486
1m56_A_4701m56   A     HEAHEME-A S - 497
1m56_A_4701m56   A     HEAHEME-A A - 501
1m56_A_4701m56   A     HEAHEME-A S - 504
1m56_A_4701m56   A     HEAHEME-A F - 505
1m56_A_4701m56   A     HEAHEME-A F - 508
1m56_A_4701m56   A     HEAHEME-A F - 511
2occ_A_4282occ   A     HEAHEME-A Q - 428
2occ_A_4282occ   A     HEAHEME-A P - 437
2occ_A_4282occ   A     HEAHEME-A R - 438
2occ_A_4282occ   A     HEAHEME-A R - 439
2occ_A_4282occ   A     MGMAGNESIUM ION R - 439
2occ_A_4282occ   A     HEAHEME-A Y - 440
2occ_A_4282occ   A     CUCOPPER (II) ION Y - 440
2occ_A_4282occ   A     HEAHEME-A S - 441
2occ_A_4282occ   A     HEAHEME-A S - 454
2occ_A_4282occ   A     HEAHEME-A S - 458
2occ_A_4282occ   A     HEAHEME-A S - 461
2occ_A_4282occ   A     HEAHEME-A L - 462
2occ_A_4282occ   A     HEAHEME-A V - 465
2occ_A_4282occ   A     HEAHEME-A M - 468
2occ_A_4282occ   A     HEAHEME-A I - 472

Clusters included in this Subclass
CLUSTER: HH.13.6