Information on SUBCLASS 16.1.1 |
Subclass Accession number: 9253
Subclass: 16.1.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 88.4 +/- -3.2 Average RMSD (Å) : 0.300 +/- 0.071 Consensus geometry
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Consensus Sequence: | VDNPGHPFIXTVGhVAGDEE |
(φψ)-conformation: | aabaebaabpbalbbbabaa |
Pattern: | [L] | [D] | [DQ] | [CIV] | [I] | [Q] | [T] | [G] | [V] | [D] | [N] | [P] | [G] | [H] | [P] | [F] | [I] | [KM] | [T] | [V] | [G] | [CM] | [V] | [A] | [G] | [D] | [E] | [E] | [CST] | [Y] | [ET] | [V] |
Conservation: | -0.493 | 0.734 | -1.250 | -1.651 | -0.493 | 0.120 | 0.120 | 0.734 | -0.493 | 0.734 | 0.734 | 1.348 | 0.734 | 1.962 | 1.348 | 0.734 | -0.493 | -1.720 | 0.120 | -0.493 | 0.734 | -1.068 | -0.493 | -0.493 | 0.734 | 0.734 | 0.120 | 0.120 | -1.881 | 1.348 | -1.702 | -0.493 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1crk_A_48 | 1crk | A | 48 | 79 | LDQCIQTGVDNPGHPFIKTVGMVAGDEESYEV | HHHHHHHHHH----TTS-------SSTTHHHH | aaaaaaaaaabaebaabxbavbbbabaaaaaa |
1n16_A_53 | 1n16 | A | 53 | 84 | LDDIIQTGVDNPGHPFIMTVGCVAGDEECYEV | HHHHHHHHHH----SSS-B-----SSTTHHHH | aaaaaaaaaabaebaabbxavbbbabaaaaaa |
1qh4_A_53 | 1qh4 | A | 53 | 84 | LDDVIQTGVDNPGHPFIMTVGCVAGDEESYEV | HHHHHHHHHH----SSS-B-----SSTTHHHH | aaaaaaaaaabaebaaxxbavbbxabaaaaaa |
1qk1_A_48 | 1qk1 | A | 48 | 79 | LDQCIQTGVDNPGHPFIKTVGMVAGDEETYEV | HHHHHHHHHH----SSS-B-----SSTTHHHH | aaaaaaaaaabaebaaxxbavbbxabaaaaaa |
2crk_A_53 | 2crk | A | 53 | 84 | LDDVIQTGVDNPGHPFIMTVGCVAGDEESYTV | HHHHHHHHHH---BTTB-B-----SSSTHHHH | aaaaaaaaaabaebaabxbavbbbabaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | M - 70 |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | T - 71 |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | V - 72 |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | G - 73 |
Clusters included in this Subclass |
CLUSTER: HH.17.1 |