Information on SUBCLASS 18.2.1 |
Subclass Accession number: 9260
Subclass: 18.2.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 59.3 +/- -6.5 Average RMSD (Å) : 0.367 +/- 0.153 Consensus geometry
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Consensus Sequence: | hhGGhSWpVhLGRRDSXpAXLX |
(φψ)-conformation: | aagpppbpppbgpbppabbbaa |
Pattern: | [C] | [AS] | [D] | [ILV] | [L] | [AT] | [ILV] | [A] | [AS] | [EQR] | [ADQ] | [S] | [V] | [STV] | [AL] | [AL] | [G] | [G] | [AP] | [S] | [W] | [NRT] | [V] | [LP] | [L] | [G] | [R] | [R] | [D] | [S] | [LT] | [QT] | [A] | x | [L] | [ADS] | x | [A] | [N] | [AS] | [DNS] |
Conservation: | 2.448 | -0.463 | 1.094 | -0.411 | 0.191 | -0.609 | -0.411 | 0.191 | -0.463 | -0.562 | -1.164 | 0.191 | 0.191 | -1.063 | -0.906 | -0.906 | 1.094 | 1.094 | -0.444 | 0.191 | 3.351 | -0.913 | 0.191 | -1.110 | 0.191 | 1.094 | 0.642 | 0.642 | 1.094 | 0.191 | -0.828 | -0.674 | 0.191 | -1.214 | 0.191 | -1.013 | -1.515 | 0.191 | 1.094 | -0.467 | -0.612 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gwu_A_97 | 1gwu | A | 97 | 137 | CADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANAN | HHHHHHHHHHHHHHHTT-------B--BB-SS--HHHHHHH | aaaaaaaaaaaaaaaagxxbbxxxbgxbxxabbbaaaaaaa |
1pa2_A_97 | 1pa2 | A | 97 | 137 | CSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSS | HHHHHHHHHHHHHHHTT-------B--BB-S---HHHHHHH | aaaaaaaaaaaaaaaavxxxbxxxbgxbxxabbbaaaaaaa |
1sch_A_97 | 1sch | A | 97 | 137 | CADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSD | HHHHHHHHHHHHHHHTT-------B--BB-S---HHHHHHH | aaaaaaaaaaaaaaaavxxxbxxxbgxbxxabbbaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gwu_A_97 | 1gwu | A | CACALCIUM ION | F - 130 |
1sch_A_97 | 1sch | A | PCAPYROGLUTAMIC ACID | L - 121 |
1sch_A_97 | 1sch | A | CACALCIUM ION | L - 121 |
1sch_A_97 | 1sch | A | PCAPYROGLUTAMIC ACID | G - 122 |
1sch_A_97 | 1sch | A | CACALCIUM ION | G - 122 |
1sch_A_97 | 1sch | A | CACALCIUM ION | S - 126 |
Clusters included in this Subclass |
CLUSTER: HH.18.4 |