PDB: 12as Compound: asparagine synthetase Classification: LIGASE Entry date in PDB: 1998-12-30 Resolution [Å]: 2.20 R-Factor: 0.164

CHAIN: A SWISS-PROT/TREMBL: P00963    KEYWORD: 3D-structure    Amino-acid biosynthesis    Asparagine biosynthesis    Complete proteome    Ligase    EC: 6.3.1.1 SCOP: d.104.1.1 Alpha and beta proteins (a+b)    Class II aaRS and biotin synthetases    Class II aaRS and biotin synthetases    Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain    Asparagine synthetase    Escherichia coli GO:  cytoplasm    aspartate-ammonia ligase activity    ATP binding    tRNA ligase activity    asparagine biosynthesis    tRNA aminoacylation for protein translation    CHAIN: B SWISS-PROT/TREMBL: P00963    KEYWORD: 3D-structure    Amino-acid biosynthesis    Asparagine biosynthesis    Complete proteome    Ligase    EC: 6.3.1.1 SCOP: d.104.1.1 Alpha and beta proteins (a+b)    Class II aaRS and biotin synthetases    Class II aaRS and biotin synthetases    Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain    Asparagine synthetase    Escherichia coli GO:  cytoplasm    aspartate-ammonia ligase activity    ATP binding    tRNA ligase activity    asparagine biosynthesis    tRNA aminoacylation for protein translation

Image Source: PDB

Loops in ArchDB40 clusters

12as_A_182 - HE => SUBCLASS : 1.3.2
12as_A_277 - HE => SUBCLASS : 5.21.1
12as_A_233 - HA => SUBCLASS : 4.1.2
12as_A_233 - HA => SUBCLASS : 4.1.3
12as_A_56 - HA => SUBCLASS : 7.11.1
12as_A_245 - EH => SUBCLASS : 2.2.2
12as_A_170 - HH => SUBCLASS : 5.2.2

Loops in ArchDB95 clusters

12as_A_245 - EH => SUBCLASS : 2.2.3
12as_A_277 - HE => SUBCLASS : 5.42.1
12as_A_233 - HA => SUBCLASS : 4.1.2
12as_A_233 - HA => SUBCLASS : 4.1.4
12as_A_56 - HA => SUBCLASS : 7.15.1
12as_A_56 - HA => SUBCLASS : 9.15.1

Loops in ArchDB-EC clusters

12as_A_233 - HA => SUBCLASS : 4.1.2

Loops not clustered in ArchDB

12as_A_29 - AR
12as_A_37 - AR
12as_A_29 - AR
12as_A_37 - AR
12as_A_67 - EH
12as_A_113 - EH
12as_A_290 - EH
12as_A_166 - EH
12as_A_233 - HA
12as_A_195 - HA
12as_A_91 - HA
12as_A_56 - HA
12as_A_195 - HA
12as_A_91 - HA
12as_A_5 - HE
12as_A_130 - HE
12as_A_76 - HE
12as_A_297 - HH
12as_A_258 - HH

11as A - percentage of sequence identity: 100
11as B - percentage of sequence identity: 100
12as A - percentage of sequence identity: 100
12as B - percentage of sequence identity: 100