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Information on 16vp
PDB: 16vp
Compound: vp16, vmw65, atif
Classification: TRANSCRIPTIONAL REGULATORY PROTEIN
Entry date in PDB: 1999-07-16
Resolution [Å]: 2.10
R-Factor: 0.192


CHAIN: A
SWISS-PROT/TREMBL: P06492
   KEYWORD: 3D-structure    DNA-binding    Trans-acting factor    Transcription regulation   
SCOP: d.180.1.1 Alpha and beta proteins (a+b)    Conserved core of transcriptional regulatory protein vp16    Conserved core of transcriptional regulatory protein vp16    Conserved core of transcriptional regulatory protein vp16    Conserved core of transcriptional regulatory protein vp16    Herpes simplex virus type 1
GO:  DNA binding    regulation of transcription, DNA-dependent   
16vp Image
Image Source: PDB

Stored Loops of 16vp

Loops in ArchDB40 clusters

16vp_A_250 - HE => SUBCLASS : 0.1.26
16vp_A_285 - EH => SUBCLASS : 1.1.4
16vp_A_256 - EH => SUBCLASS : 2.1.17
16vp_A_58 - HH => SUBCLASS : 1.3.10

Loops in ArchDB95 clusters

16vp_A_256 - EH => SUBCLASS : 2.1.2
16vp_A_285 - EH => SUBCLASS : 2.2.1
16vp_A_256 - EH => SUBCLASS : 2.3.5
16vp_A_58 - HH => SUBCLASS : 1.3.13
16vp_A_250 - HE => SUBCLASS : 0.1.38

Loops not clustered in ArchDB

16vp_A_279 - HA
16vp_A_264 - HE
16vp_A_332 - HE
16vp_A_74 - HH
16vp_A_109 - HH
16vp_A_146 - HH
16vp_A_203 - HH
16vp_A_289 - HH

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