PDB: 1bam Compound: Restriction endonuclease bamhi Classification: ENDONUCLEASE Entry date in PDB: 1995-02-27 Resolution [Å]: 1.95 R-Factor: 0.190

CHAIN: - SWISS-PROT/TREMBL: P23940    KEYWORD: 3D-structure    Endonuclease    Hydrolase    Magnesium    Metal-binding    Nuclease    Plasmid    Restriction system    EC: 3.1.21.4 SCOP: c.52.1.3 Alpha and beta proteins (a/b)    Restriction endonuclease-like    Restriction endonuclease-like    Restriction endonuclease BamHI    Restriction endonuclease BamHI    Bacillus amyloliquefaciens GO:  type II site-specific deoxyribonuclease activity    DNA restriction-modification system

Image Source: PDB

Loops in ArchDB40 clusters

1bam_*_58 - HE => SUBCLASS : 2.1.1
1bam_*_117 - HE => SUBCLASS : 4.2.2
1bam_*_2 - EH => SUBCLASS : 1.1.1
1bam_*_138 - EH => SUBCLASS : 1.1.8
1bam_*_174 - AR => SUBCLASS : 1.1.13

Loops in ArchDB95 clusters

1bam_*_138 - EH => SUBCLASS : 1.1.29
1bam_*_2 - EH => SUBCLASS : 1.1.29
1bam_*_2 - EH => SUBCLASS : 1.1.31
1bam_*_2 - EH => SUBCLASS : 1.1.37
1bam_*_174 - AR => SUBCLASS : 2.1.4
1bam_*_10 - HH => SUBCLASS : 1.1.1
1bam_*_58 - HE => SUBCLASS : 2.1.1
1bam_*_58 - HE => SUBCLASS : 2.1.5
1bam_*_58 - HE => SUBCLASS : 2.1.9
1bam_*_117 - HE => SUBCLASS : 4.2.1
1bam_*_117 - HE => SUBCLASS : 4.4.1

Loops not clustered in ArchDB

1bam_*_46 - EH
1bam_*_104 - EH
1bam_*_183 - EH
1bam_*_75 - HA
1bam_*_95 - HA
1bam_*_20 - HE
1bam_*_159 - HE
1bam_*_146 - HH

1bhm A - percentage of sequence identity: 100
1bhm B - percentage of sequence identity: 100
1esg A - percentage of sequence identity: 100
1esg B - percentage of sequence identity: 100
2bam A - percentage of sequence identity: 100
2bam B - percentage of sequence identity: 100
3bam B - percentage of sequence identity: 100