PDB: 1e3o Compound: octamer-binding transcription factor 1 Classification: TRANSCRIPTION FACTOR Entry date in PDB: 2001-11-10 Resolution [Å]: 1.90 R-Factor: 0.220

CHAIN: C SWISS-PROT/TREMBL: P14859    KEYWORD: 3D-structure    Activator    Alternative splicing    DNA-binding    Homeobox    Nuclear protein    Transcription regulation    SCOP: a.4.1.1 All alpha proteins    DNA/RNA-binding 3-helical bundle    Homeodomain-like    Homeodomain    Oct-1 POU Homeodomain    Human (Homo sapiens) SCOP: a.35.1.1 All alpha proteins    lambda repressor-like DNA-binding domains    lambda repressor-like DNA-binding domains    POU-specific domain    Oct-1    Human (Homo sapiens) GO:  nucleus    DNA binding    transcription factor activity    regulation of transcription    regulation of transcription, DNA-dependent

Image Source: PDB

Loops in ArchDB40 clusters

1e3o_C_128 - HH => SUBCLASS : 3.1.1
1e3o_C_6 - HH => SUBCLASS : 3.1.1
1e3o_C_44 - HH => SUBCLASS : 4.5.5
1e3o_C_27 - HH => SUBCLASS : 5.1.4
1e3o_C_110 - HH => SUBCLASS : 5.18.1

Loops in ArchDB95 clusters

1e3o_C_128 - HH => SUBCLASS : 3.1.1
1e3o_C_6 - HH => SUBCLASS : 3.1.1
1e3o_C_6 - HH => SUBCLASS : 3.1.5
1e3o_C_44 - HH => SUBCLASS : 4.4.4
1e3o_C_27 - HH => SUBCLASS : 5.1.1
1e3o_C_110 - HH => SUBCLASS : 5.9.1

Loops not clustered in ArchDB

1e3o_C_57 - HH

1cqt A - percentage of sequence identity: 95
1cqt B - percentage of sequence identity: 95
1gt0 C - percentage of sequence identity: 96
1hdp - - percentage of sequence identity: 86
1hf0 A - percentage of sequence identity: 96
1hf0 B - percentage of sequence identity: 96
1o4x A - percentage of sequence identity: 95
1oct C - percentage of sequence identity: 95
1pog - - percentage of sequence identity: 90
1pou - - percentage of sequence identity: 98