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Information on 1e3o
PDB: 1e3o
Compound: octamer-binding transcription factor 1
Classification: TRANSCRIPTION FACTOR
Entry date in PDB: 2001-11-10
Resolution [Å]: 1.90
R-Factor: 0.220


CHAIN: C
SWISS-PROT/TREMBL: P14859
   KEYWORD: 3D-structure    Activator    Alternative splicing    DNA-binding    Homeobox    Nuclear protein    Transcription regulation   
SCOP: a.4.1.1 All alpha proteins    DNA/RNA-binding 3-helical bundle    Homeodomain-like    Homeodomain    Oct-1 POU Homeodomain    Human (Homo sapiens)
SCOP: a.35.1.1 All alpha proteins    lambda repressor-like DNA-binding domains    lambda repressor-like DNA-binding domains    POU-specific domain    Oct-1    Human (Homo sapiens)
GO:  nucleus    DNA binding    transcription factor activity    regulation of transcription    regulation of transcription, DNA-dependent   
1e3o Image
Image Source: PDB

Stored Loops of 1e3o

Loops in ArchDB40 clusters

1e3o_C_6 - HH => SUBCLASS : 3.1.1
1e3o_C_128 - HH => SUBCLASS : 3.1.1
1e3o_C_44 - HH => SUBCLASS : 4.5.5
1e3o_C_27 - HH => SUBCLASS : 5.1.4
1e3o_C_110 - HH => SUBCLASS : 5.18.1

Loops in ArchDB95 clusters

1e3o_C_128 - HH => SUBCLASS : 3.1.1
1e3o_C_6 - HH => SUBCLASS : 3.1.1
1e3o_C_6 - HH => SUBCLASS : 3.1.5
1e3o_C_44 - HH => SUBCLASS : 4.4.4
1e3o_C_27 - HH => SUBCLASS : 5.1.1
1e3o_C_110 - HH => SUBCLASS : 5.9.1

Loops not clustered in ArchDB

1e3o_C_57 - HH

Homologous structures to 1e3o classified in ArchDB

1cqt A - percentage of sequence identity: 95
1cqt B - percentage of sequence identity: 95
1gt0 C - percentage of sequence identity: 96
1hdp - - percentage of sequence identity: 86
1hf0 A - percentage of sequence identity: 96
1hf0 B - percentage of sequence identity: 96
1o4x A - percentage of sequence identity: 95
1oct C - percentage of sequence identity: 95
1pog - - percentage of sequence identity: 90
1pou - - percentage of sequence identity: 98