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Information on 1e79
PDB: 1e79
Compound: atp synthase alpha chain heart isoform
Classification: ATP PHOSPHORYLASE
Entry date in PDB: 2000-11-03
Resolution [Å]: 2.40
R-Factor: 0.225


CHAIN: A


CHAIN: B


CHAIN: C


CHAIN: D
SWISS-PROT/TREMBL: P00829
   KEYWORD: 3D-structure    ATP synthesis    ATP-binding    CF(1)    Hydrogen ion transport    Hydrolase    Mitochondrion    Transit peptide   
EC: 3.6.3.14
SCOP: a.69.1.1 All alpha proteins    Left-handed superhelix    C-terminal domain of alpha and beta subunits of F1 ATP synthase    C-terminal domain of alpha and beta subunits of F1 ATP synthase    F1 ATP synthase beta subunit, domain 3    Cow (Bos taurus)
SCOP: b.49.1.1 All beta proteins    Domain of alpha and beta subunits of F1 ATP synthase-like    N-terminal domain of alpha and beta subunits of F1 ATP synthase    N-terminal domain of alpha and beta subunits of F1 ATP synthase    F1 ATP synthase beta subunit, domain 1    Cow (Bos taurus)
SCOP: c.37.1.11 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    RecA protein-like (ATPase-domain)    Central domain of beta subunit of F1 ATP synthase    Cow (Bos taurus)
GO:  hydrogen-translocating F-type ATPase complex    integral to membrane    proton-transporting two-sector ATPase complex    ATP binding    hydrogen-exporting ATPase activity, phosphorylative mechanism    hydrogen-transporting ATP synthase activity, rotational mechanism    hydrogen-transporting ATPase activity, rotational mechanism    nucleoside-triphosphatase activity    nucleotide binding    ATP biosynthesis    ATP synthesis coupled proton transport   


CHAIN: E
SWISS-PROT/TREMBL: P00829
   KEYWORD: 3D-structure    ATP synthesis    ATP-binding    CF(1)    Hydrogen ion transport    Hydrolase    Mitochondrion    Transit peptide   
EC: 3.6.3.14
SCOP: a.69.1.1 All alpha proteins    Left-handed superhelix    C-terminal domain of alpha and beta subunits of F1 ATP synthase    C-terminal domain of alpha and beta subunits of F1 ATP synthase    F1 ATP synthase beta subunit, domain 3    Cow (Bos taurus)
SCOP: b.49.1.1 All beta proteins    Domain of alpha and beta subunits of F1 ATP synthase-like    N-terminal domain of alpha and beta subunits of F1 ATP synthase    N-terminal domain of alpha and beta subunits of F1 ATP synthase    F1 ATP synthase beta subunit, domain 1    Cow (Bos taurus)
SCOP: c.37.1.11 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    RecA protein-like (ATPase-domain)    Central domain of beta subunit of F1 ATP synthase    Cow (Bos taurus)
GO:  hydrogen-translocating F-type ATPase complex    integral to membrane    proton-transporting two-sector ATPase complex    ATP binding    hydrogen-exporting ATPase activity, phosphorylative mechanism    hydrogen-transporting ATP synthase activity, rotational mechanism    hydrogen-transporting ATPase activity, rotational mechanism    nucleoside-triphosphatase activity    nucleotide binding    ATP biosynthesis    ATP synthesis coupled proton transport   


CHAIN: F
SWISS-PROT/TREMBL: P00829
   KEYWORD: 3D-structure    ATP synthesis    ATP-binding    CF(1)    Hydrogen ion transport    Hydrolase    Mitochondrion    Transit peptide   
EC: 3.6.3.14
SCOP: a.69.1.1 All alpha proteins    Left-handed superhelix    C-terminal domain of alpha and beta subunits of F1 ATP synthase    C-terminal domain of alpha and beta subunits of F1 ATP synthase    F1 ATP synthase beta subunit, domain 3    Cow (Bos taurus)
SCOP: b.49.1.1 All beta proteins    Domain of alpha and beta subunits of F1 ATP synthase-like    N-terminal domain of alpha and beta subunits of F1 ATP synthase    N-terminal domain of alpha and beta subunits of F1 ATP synthase    F1 ATP synthase beta subunit, domain 1    Cow (Bos taurus)
SCOP: c.37.1.11 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    RecA protein-like (ATPase-domain)    Central domain of beta subunit of F1 ATP synthase    Cow (Bos taurus)
GO:  hydrogen-translocating F-type ATPase complex    integral to membrane    proton-transporting two-sector ATPase complex    ATP binding    hydrogen-exporting ATPase activity, phosphorylative mechanism    hydrogen-transporting ATP synthase activity, rotational mechanism    hydrogen-transporting ATPase activity, rotational mechanism    nucleoside-triphosphatase activity    nucleotide binding    ATP biosynthesis    ATP synthesis coupled proton transport   


CHAIN: G


CHAIN: H


CHAIN: I
1e79 Image
Image Source: PDB

Stored Loops of 1e79

Loops in ArchDB40 clusters

1e79_A_240 - HE => SUBCLASS : 1.1.3
1e79_A_298 - HE => SUBCLASS : 1.2.15
1e79_D_320 - HE => SUBCLASS : 2.3.6
1e79_D_138 - HE => SUBCLASS : 2.6.1
1e79_A_210 - HE => SUBCLASS : 5.5.1
1e79_A_60 - HA => SUBCLASS : 2.2.1
1e79_H_16 - HA => SUBCLASS : 2.2.1
1e79_H_16 - HA => SUBCLASS : 2.2.3
1e79_D_10 - HA => SUBCLASS : 2.3.6
1e79_D_46 - HA => SUBCLASS : 2.4.5
1e79_A_52 - HA => SUBCLASS : 5.1.1
1e79_G_105 - EH => SUBCLASS : 1.2.14
1e79_A_263 - EH => SUBCLASS : 1.6.1
1e79_D_331 - EH => SUBCLASS : 2.2.9
1e79_A_348 - EH => SUBCLASS : 2.2.9
1e79_D_331 - EH => SUBCLASS : 3.3.2
1e79_A_348 - EH => SUBCLASS : 3.3.9
1e79_A_200 - EH => SUBCLASS : 3.4.1
1e79_A_200 - EH => SUBCLASS : 3.4.2
1e79_D_180 - EH => SUBCLASS : 3.4.2
1e79_D_132 - EH => SUBCLASS : 3.21.2
1e79_A_229 - EH => SUBCLASS : 4.2.1
1e79_D_215 - EH => SUBCLASS : 4.2.1
1e79_D_146 - AR => SUBCLASS : 2.2.5
1e79_D_74 - AR => SUBCLASS : 2.9.1
1e79_D_146 - AR => SUBCLASS : 3.3.1

Loops in ArchDB95 clusters

1e79_G_105 - EH => SUBCLASS : 1.3.15
1e79_A_263 - EH => SUBCLASS : 1.5.1
1e79_D_251 - EH => SUBCLASS : 1.5.1
1e79_A_348 - EH => SUBCLASS : 2.2.1
1e79_D_331 - EH => SUBCLASS : 2.2.1
1e79_A_348 - EH => SUBCLASS : 3.1.15
1e79_A_200 - EH => SUBCLASS : 3.6.1
1e79_A_200 - EH => SUBCLASS : 3.14.1
1e79_D_180 - EH => SUBCLASS : 3.14.1
1e79_D_132 - EH => SUBCLASS : 3.25.1
1e79_D_215 - EH => SUBCLASS : 4.2.1
1e79_A_229 - EH => SUBCLASS : 4.2.1
1e79_D_354 - EH => SUBCLASS : 4.35.2
1e79_D_151 - EH => SUBCLASS : 5.5.1
1e79_H_89 - AR => SUBCLASS : 1.2.23
1e79_D_146 - AR => SUBCLASS : 3.3.2
1e79_D_146 - AR => SUBCLASS : 3.3.7
1e79_A_240 - HE => SUBCLASS : 1.1.1
1e79_A_240 - HE => SUBCLASS : 1.2.1
1e79_D_320 - HE => SUBCLASS : 2.2.5
1e79_A_210 - HE => SUBCLASS : 5.7.1
1e79_A_60 - HA => SUBCLASS : 2.2.1
1e79_H_16 - HA => SUBCLASS : 2.2.1
1e79_D_10 - HA => SUBCLASS : 2.3.3
1e79_D_46 - HA => SUBCLASS : 2.5.4
1e79_A_52 - HA => SUBCLASS : 3.1.1
1e79_A_52 - HA => SUBCLASS : 5.4.1

Loops not clustered in ArchDB

1e79_H_26 - AR
1e79_D_112 - AR
1e79_D_94 - AR
1e79_D_83 - AR
1e79_D_57 - AR
1e79_A_107 - AR
1e79_A_96 - AR
1e79_A_87 - AR
1e79_A_70 - AR
1e79_A_38 - AR
1e79_D_20 - AR
1e79_H_73 - AR
1e79_H_46 - AR
1e79_H_54 - AR
1e79_A_165 - EH
1e79_G_170 - EH
1e79_G_126 - EH
1e79_A_320 - EH
1e79_A_371 - EH
1e79_D_304 - EH
1e79_G_68 - EH
1e79_A_125 - EH
1e79_H_97 - EH
1e79_H_35 - HA
1e79_H_61 - HA
1e79_H_80 - HA
1e79_A_310 - HA
1e79_A_28 - HA
1e79_D_35 - HA
1e79_G_158 - HA
1e79_G_138 - HE
1e79_G_110 - HE
1e79_G_81 - HE
1e79_G_3 - HE
1e79_D_337 - HE
1e79_D_285 - HE
1e79_D_226 - HE
1e79_D_190 - HE
1e79_D_162 - HE
1e79_A_354 - HE
1e79_A_337 - HE
1e79_A_187 - HE
1e79_A_151 - HE
1e79_D_259 - HH
1e79_D_360 - HH
1e79_D_365 - HH
1e79_D_400 - HH
1e79_D_422 - HH
1e79_A_477 - HH
1e79_A_461 - HH
1e79_A_438 - HH
1e79_A_412 - HH
1e79_A_381 - HH
1e79_A_271 - HH
1e79_A_175 - HH
1e79_H_105 - HH
1e79_D_434 - HH

Homologous structures to 1e79 classified in ArchDB

1bmf A - percentage of sequence identity: 100
1bmf B - percentage of sequence identity: 100
1bmf C - percentage of sequence identity: 100
1cow A - percentage of sequence identity: 99
1cow B - percentage of sequence identity: 99
1cow C - percentage of sequence identity: 99
1e1q A - percentage of sequence identity: 100
1e1q B - percentage of sequence identity: 100
1e1q C - percentage of sequence identity: 100
1e1r A - percentage of sequence identity: 100
1e1r B - percentage of sequence identity: 100
1e1r C - percentage of sequence identity: 100
1e79 A - percentage of sequence identity: 100
1e79 B - percentage of sequence identity: 100
1e79 C - percentage of sequence identity: 100
1efr A - percentage of sequence identity: 99
1efr B - percentage of sequence identity: 99
1efr C - percentage of sequence identity: 99
1h8e A - percentage of sequence identity: 100
1h8e B - percentage of sequence identity: 100
1h8e C - percentage of sequence identity: 100
1h8e H - percentage of sequence identity: 100
1h8h A - percentage of sequence identity: 100
1h8h B - percentage of sequence identity: 100
1h8h C - percentage of sequence identity: 100
1mab A - percentage of sequence identity: 98
1nbm A - percentage of sequence identity: 100
1nbm B - percentage of sequence identity: 100
1nbm C - percentage of sequence identity: 100
1ohh A - percentage of sequence identity: 100
1ohh B - percentage of sequence identity: 100
1ohh C - percentage of sequence identity: 100
1qo1 A - percentage of sequence identity: 100
1qo1 B - percentage of sequence identity: 100
1qo1 C - percentage of sequence identity: 100
1sky B - percentage of sequence identity: 60
1w0j A - percentage of sequence identity: 100
1w0j B - percentage of sequence identity: 100
1w0j C - percentage of sequence identity: 100
1w0k A - percentage of sequence identity: 100
1w0k B - percentage of sequence identity: 100
1w0k C - percentage of sequence identity: 100
null nu - percentage of sequence identity: 0