PDB: 1ep5 Compound: capsid protein c Classification: HYDROLASE Entry date in PDB: 2003-07-08 Resolution [Å]: 2.30 R-Factor: 0.228

CHAIN: A SWISS-PROT/TREMBL: P05674    KEYWORD: 3D-structure    Coat protein    Glycoprotein    Hydrolase    Polyprotein    Serine protease    Transmembrane    EC: 3.4.21.- SCOP: b.47.1.3 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral proteases    Viral capsid protein    Venezuelan equine encephalitis virus GO:  membrane    viral capsid    serine-type endopeptidase activity    structural molecule activity    proteolysis and peptidolysis    CHAIN: B SWISS-PROT/TREMBL: P05674    KEYWORD: 3D-structure    Coat protein    Glycoprotein    Hydrolase    Polyprotein    Serine protease    Transmembrane    EC: 3.4.21.- SCOP: b.47.1.3 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral proteases    Viral capsid protein    Venezuelan equine encephalitis virus GO:  membrane    viral capsid    serine-type endopeptidase activity    structural molecule activity    proteolysis and peptidolysis    CHAIN: C SWISS-PROT/TREMBL: P05674    KEYWORD: 3D-structure    Coat protein    Glycoprotein    Hydrolase    Polyprotein    Serine protease    Transmembrane    EC: 3.4.21.- SCOP: b.47.1.3 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral proteases    Viral capsid protein    Venezuelan equine encephalitis virus GO:  membrane    viral capsid    serine-type endopeptidase activity    structural molecule activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB95 clusters

1ep5_A_175 - EH => SUBCLASS : 1.1.8
1ep5_A_237 - HA => SUBCLASS : 2.3.11
1ep5_A_168 - HA => SUBCLASS : 4.1.1
1ep5_A_250 - HA => SUBCLASS : 4.3.1
1ep5_A_229 - HA => SUBCLASS : 5.1.2
1ep5_A_229 - HA => SUBCLASS : 5.1.7
1ep5_A_250 - HA => SUBCLASS : 5.4.6

Loops in ArchDB-EC clusters

1ep5_A_160 - HE => SUBCLASS : 3.19.2

Loops not clustered in ArchDB

1ep5_A_146 - AR
1ep5_A_213 - AR
1ep5_A_213 - AR
1ep5_A_146 - AR
1ep5_A_156 - EH
1ep5_A_229 - HA
1ep5_A_198 - HA
1ep5_A_237 - HA
1ep5_A_168 - HA
1ep5_A_205 - HA
1ep5_A_135 - HA
1ep5_A_127 - HA
1ep5_A_205 - HA
1ep5_A_198 - HA
1ep5_A_135 - HA
1ep5_A_127 - HA
1ep5_A_250 - HA
1ep5_A_182 - HE

1dyl A - percentage of sequence identity: 65
1dyl B - percentage of sequence identity: 65
1dyl C - percentage of sequence identity: 65
1dyl D - percentage of sequence identity: 65
1ep5 A - percentage of sequence identity: 100
1ep5 B - percentage of sequence identity: 100
1ep5 C - percentage of sequence identity: 100
1ep6 A - percentage of sequence identity: 100
1ep6 B - percentage of sequence identity: 100
1ep6 C - percentage of sequence identity: 100
1vcp A - percentage of sequence identity: 65
1vcp B - percentage of sequence identity: 65
1vcp C - percentage of sequence identity: 65
1vcq A - percentage of sequence identity: 65
1vcq B - percentage of sequence identity: 65
1wyk A - percentage of sequence identity: 60
1wyk B - percentage of sequence identity: 60
1wyk C - percentage of sequence identity: 60
1wyk D - percentage of sequence identity: 60
1z8y Q - percentage of sequence identity: 60
1z8y R - percentage of sequence identity: 60
1z8y S - percentage of sequence identity: 60
1z8y T - percentage of sequence identity: 60
2snv - - percentage of sequence identity: 60