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Information on 1g1t
PDB: 1g1t
Compound: e-selectin
Classification: IMMUNE SYSTEM, MEMBRANE PROTEIN
Entry date in PDB: 2001-10-13
Resolution [Å]: 1.50
R-Factor: 0.196


CHAIN: A
SWISS-PROT/TREMBL: P16581
   KEYWORD: 3D-structure    Cell adhesion    EGF-like domain    Glycoprotein    Lectin    Polymorphism    Repeat    Selectin    Signal    Sushi    Transmembrane   
SCOP: d.169.1.1 Alpha and beta proteins (a+b)    C-type lectin-like    C-type lectin-like    C-type lectin domain    E-selectin    Human (Homo sapiens)
SCOP: g.3.11.1 Small proteins    Knottins (small inhibitors, toxins, lectins)    EGF/Laminin    EGF-type module    E-selectin, EGF-domain    Human (Homo sapiens)
GO:  membrane    sugar binding    cell adhesion   
1g1t Image
Image Source: PDB

Stored Loops of 1g1t

Loops in ArchDB40 clusters

1g1t_A_12 - HE => SUBCLASS : 2.5.7
1g1t_A_53 - HA => SUBCLASS : 2.1.1
1g1t_A_131 - HA => SUBCLASS : 2.6.1
1g1t_A_148 - HA => SUBCLASS : 5.16.1
1g1t_A_2 - EH => SUBCLASS : 5.3.1
1g1t_A_25 - EH => SUBCLASS : 5.10.1
1g1t_A_139 - AR => SUBCLASS : 3.5.1
1g1t_A_139 - AR => SUBCLASS : 3.5.4
1g1t_A_104 - AR => SUBCLASS : 5.4.2

Loops in ArchDB95 clusters

1g1t_A_2 - EH => SUBCLASS : 5.4.1
1g1t_A_25 - EH => SUBCLASS : 5.7.1
1g1t_A_139 - AR => SUBCLASS : 1.1.2
1g1t_A_139 - AR => SUBCLASS : 2.3.1
1g1t_A_139 - AR => SUBCLASS : 2.3.2
1g1t_A_104 - AR => SUBCLASS : 5.4.2
1g1t_A_12 - HE => SUBCLASS : 2.3.10
1g1t_A_53 - HA => SUBCLASS : 2.1.1
1g1t_A_131 - HA => SUBCLASS : 2.4.1
1g1t_A_148 - HA => SUBCLASS : 5.14.1

Loops not clustered in ArchDB

1g1t_A_59 - AR
1g1t_A_114 - AR
1g1t_A_49 - HA
1g1t_A_90 - HA
1g1t_A_32 - HE

Homologous structures to 1g1t classified in ArchDB

1esl - - percentage of sequence identity: 100
1fsb - - percentage of sequence identity: 60
1g1q A - percentage of sequence identity: 62
1g1q B - percentage of sequence identity: 62
1g1q C - percentage of sequence identity: 62
1g1q D - percentage of sequence identity: 62
1g1r A - percentage of sequence identity: 62
1g1r B - percentage of sequence identity: 62
1g1r C - percentage of sequence identity: 62
1g1r D - percentage of sequence identity: 62
1g1s B - percentage of sequence identity: 62