PDB: 1gkz Compound: [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] Classification: TRANSFERASE Entry date in PDB: 2001-10-11 Resolution [Å]: 2.20 R-Factor: 0.237

CHAIN: A SWISS-PROT/TREMBL: Q00972    KEYWORD: 3D-structure    Kinase    Mitochondrion    Phosphorylation    Transferase    Transit peptide    EC: 2.7.1.115 SCOP: a.29.5.1 All alpha proteins    Bromodomain-like    alpha-ketoacid dehydrogenase kinase, N-terminal domain    alpha-ketoacid dehydrogenase kinase, N-terminal domain    Branched-chain alpha-ketoacid dehydrogenase kinase (BCK)    Rat (Rattus norvegicus) SCOP: d.122.1.4 Alpha and beta proteins (a+b)    ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase    ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase    alpha-ketoacid dehydrogenase kinase, C-terminal domain    Branched-chain alpha-ketoacid dehydrogenase kinase (BCK)    Rat (Rattus norvegicus) GO:  ATP binding    kinase activity    transferase activity, transferring phosphorus-containing groups    phosphorylation    protein amino acid phosphorylation

Image Source: PDB

Loops in ArchDB40 clusters

1gkz_A_339 - HE => SUBCLASS : 1.1.1
1gkz_A_197 - HE => SUBCLASS : 1.3.4
1gkz_A_197 - HE => SUBCLASS : 5.9.1
1gkz_A_155 - HE => SUBCLASS : 5.13.1
1gkz_A_268 - HA => SUBCLASS : 2.2.3
1gkz_A_187 - HA => SUBCLASS : 2.3.1
1gkz_A_187 - HA => SUBCLASS : 2.3.2
1gkz_A_187 - HA => SUBCLASS : 2.3.3
1gkz_A_353 - HA => SUBCLASS : 3.6.1
1gkz_A_232 - EH => SUBCLASS : 1.1.38
1gkz_A_84 - HH => SUBCLASS : 1.1.11
1gkz_A_56 - HH => SUBCLASS : 2.1.1

Loops in ArchDB95 clusters

1gkz_A_84 - HH => SUBCLASS : 1.1.3
1gkz_A_56 - HH => SUBCLASS : 2.1.1
1gkz_A_339 - HE => SUBCLASS : 1.1.1
1gkz_A_197 - HE => SUBCLASS : 4.24.1
1gkz_A_155 - HE => SUBCLASS : 5.17.1
1gkz_A_268 - HA => SUBCLASS : 2.2.3
1gkz_A_187 - HA => SUBCLASS : 2.3.1
1gkz_A_353 - HA => SUBCLASS : 3.8.1

Loops in ArchDB-EC clusters

1gkz_A_56 - HH => SUBCLASS : 2.1.2

Loops not clustered in ArchDB

1gkz_A_222 - AR
1gkz_A_222 - AR
1gkz_A_45 - EH
1gkz_A_191 - EH
1gkz_A_278 - EH
1gkz_A_268 - HA
1gkz_A_187 - HA
1gkz_A_39 - HA
1gkz_A_39 - HA
1gkz_A_353 - HA
1gkz_A_237 - HE
1gkz_A_135 - HH
1gkz_A_115 - HH
1gkz_A_90 - HH

Loops not clustered in ArchDB-KI

1gkz_A_222 - AR
1gkz_A_232 - EH
1gkz_A_278 - EH
1gkz_A_45 - EH
1gkz_A_191 - EH
1gkz_A_268 - HA
1gkz_A_39 - HA
1gkz_A_353 - HA
1gkz_A_197 - HE
1gkz_A_237 - HE
1gkz_A_155 - HE
1gkz_A_339 - HE
1gkz_A_115 - HH
1gkz_A_56 - HH
1gkz_A_84 - HH
1gkz_A_135 - HH
1gkz_A_90 - HH

1gjv A - percentage of sequence identity: 100
1gkx A - percentage of sequence identity: 100