PDB: 1h5w Compound: upper collar protein Classification: VIRUS Entry date in PDB: 2002-02-13 Resolution [Å]: 2.10 R-Factor: 0.205

CHAIN: A SWISS-PROT/TREMBL: P04332    KEYWORD: 3D-structure    Late protein    SCOP: e.27.1.1 Multi-domain proteins (alpha and beta)    Upper collar protein gp10 (connector protein)    Upper collar protein gp10 (connector protein)    Upper collar protein gp10 (connector protein)    Upper collar protein gp10 (connector protein)    Bacteriophage PHI29 GO:   CHAIN: B SWISS-PROT/TREMBL: P04332    KEYWORD: 3D-structure    Late protein    SCOP: e.27.1.1 Multi-domain proteins (alpha and beta)    Upper collar protein gp10 (connector protein)    Upper collar protein gp10 (connector protein)    Upper collar protein gp10 (connector protein)    Upper collar protein gp10 (connector protein)    Bacteriophage PHI29 GO:   CHAIN: C SWISS-PROT/TREMBL: P04332    KEYWORD: 3D-structure    Late protein    SCOP: e.27.1.1 Multi-domain proteins (alpha and beta)    Upper collar protein gp10 (connector protein)    Upper collar protein gp10 (connector protein)    Upper collar protein gp10 (connector protein)    Upper collar protein gp10 (connector protein)    Bacteriophage PHI29 GO:

Image Source: PDB

Loops in ArchDB40 clusters

1h5w_A_92 - HA => SUBCLASS : 2.2.14
1h5w_A_62 - HA => SUBCLASS : 3.2.1

Loops in ArchDB95 clusters

1h5w_A_39 - EH => SUBCLASS : 7.34.1
1h5w_A_92 - HA => SUBCLASS : 2.2.4
1h5w_A_62 - HA => SUBCLASS : 3.3.1

Loops not clustered in ArchDB

1h5w_A_72 - AR
1h5w_A_101 - AR
1h5w_A_119 - EH
1h5w_A_159 - EH
1h5w_A_196 - EH
1h5w_A_78 - HA
1h5w_A_247 - HE
1h5w_A_171 - HE
1h5w_A_131 - HE
1h5w_A_50 - HE
1h5w_A_18 - HE
1h5w_A_207 - HH

1fou A - percentage of sequence identity: 98
1fou B - percentage of sequence identity: 98
1fou C - percentage of sequence identity: 98
1fou D - percentage of sequence identity: 98
1fou E - percentage of sequence identity: 98
1fou F - percentage of sequence identity: 98
1fou G - percentage of sequence identity: 98
1fou H - percentage of sequence identity: 98
1fou I - percentage of sequence identity: 98
1fou J - percentage of sequence identity: 98
1fou K - percentage of sequence identity: 98
1fou L - percentage of sequence identity: 98
1h5w A - percentage of sequence identity: 100
1h5w B - percentage of sequence identity: 100
1h5w C - percentage of sequence identity: 100
1ijg A - percentage of sequence identity: 100
1ijg B - percentage of sequence identity: 100
1ijg C - percentage of sequence identity: 100
1ijg D - percentage of sequence identity: 100
1ijg E - percentage of sequence identity: 100
1ijg F - percentage of sequence identity: 100
1ijg G - percentage of sequence identity: 100
1ijg H - percentage of sequence identity: 100
1ijg I - percentage of sequence identity: 100
1ijg J - percentage of sequence identity: 100
1ijg K - percentage of sequence identity: 100
1ijg L - percentage of sequence identity: 100
1jnb A - percentage of sequence identity: 100
1jnb B - percentage of sequence identity: 100
1jnb C - percentage of sequence identity: 100
1jnb D - percentage of sequence identity: 100
1jnb E - percentage of sequence identity: 100
1jnb F - percentage of sequence identity: 100
1jnb G - percentage of sequence identity: 100
1jnb H - percentage of sequence identity: 100
1jnb I - percentage of sequence identity: 100
1jnb J - percentage of sequence identity: 100
1jnb K - percentage of sequence identity: 100
1jnb L - percentage of sequence identity: 100