ArchDB - Biological DataBase of Protein Loops

Information on 1ih7

PDB: 1ih7
Compound: DNA polymerase
Classification: TRANSFERASE
Entry date in PDB: 2001-06-13
Resolution [Å]: 2.21
R-Factor: 0.215

CHAIN: A

SWISS-PROT/TREMBL: Q38087
   KEYWORD: 3D-structure    DNA replication    DNA-binding    DNA-directed DNA polymerase    Exonuclease    Hydrolase    Transferase
EC: 2.7.7.7
SCOP: c.55.3.5 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Ribonuclease H-like    DnaQ-like 3'-5' exonuclease    Exonuclease domain of family B DNA polymerases    Bacteriophage RB69
SCOP: e.8.1.1 Multi-domain proteins (alpha and beta)    DNA/RNA polymerases    DNA/RNA polymerases    DNA polymerase I    Family B DNA polymerase    Bacteriophage RB69
GO:  3'-5' exonuclease activity    DNA binding    DNA-directed DNA polymerase activity    nucleotide binding    DNA replication

Image Source: PDB

Stored Loops of 1ih7

Loops in ArchDB95 clusters

1ih7_A_624 - EH => SUBCLASS : 0.1.14
1ih7_A_407 - EH => SUBCLASS : 1.4.2
1ih7_A_186 - EH => SUBCLASS : 2.1.1
1ih7_A_57 - EH => SUBCLASS : 2.1.3
1ih7_A_407 - EH => SUBCLASS : 2.6.1
1ih7_A_430 - EH => SUBCLASS : 5.25.1
1ih7_A_259 - AR => SUBCLASS : 1.1.2
1ih7_A_402 - AR => SUBCLASS : 1.2.8
1ih7_A_402 - AR => SUBCLASS : 1.2.15
1ih7_A_402 - AR => SUBCLASS : 3.1.3
1ih7_A_312 - HH => SUBCLASS : 1.3.5
1ih7_A_739 - HH => SUBCLASS : 1.4.1
1ih7_A_524 - HH => SUBCLASS : 2.1.1
1ih7_A_524 - HH => SUBCLASS : 2.1.6
1ih7_A_757 - HH => SUBCLASS : 2.1.20
1ih7_A_757 - HH => SUBCLASS : 2.1.32
1ih7_A_776 - HE => SUBCLASS : 0.1.1
1ih7_A_788 - HE => SUBCLASS : 0.1.6
1ih7_A_180 - HE => SUBCLASS : 0.1.13
1ih7_A_180 - HE => SUBCLASS : 0.1.42
1ih7_A_180 - HE => SUBCLASS : 0.1.45
1ih7_A_361 - HE => SUBCLASS : 1.1.2
1ih7_A_194 - HE => SUBCLASS : 4.8.4
1ih7_A_194 - HE => SUBCLASS : 4.62.1
1ih7_A_791 - HA => SUBCLASS : 2.1.1
1ih7_A_707 - HA => SUBCLASS : 2.1.4
1ih7_A_707 - HA => SUBCLASS : 2.1.5
1ih7_A_248 - HA => SUBCLASS : 2.2.1
1ih7_A_4 - HA => SUBCLASS : 2.3.1
1ih7_A_617 - HA => SUBCLASS : 2.6.1
1ih7_A_14 - HA => SUBCLASS : 3.1.1
1ih7_A_248 - HA => SUBCLASS : 3.1.1
1ih7_A_455 - HA => SUBCLASS : 4.5.1

Loops in ArchDB-EC clusters

1ih7_A_757 - HH => SUBCLASS : 2.1.25

Loops not clustered in ArchDB

1ih7_A_378 - AR
1ih7_A_378 - AR
1ih7_A_259 - AR
1ih7_A_50 - AR
1ih7_A_36 - AR
1ih7_A_36 - AR
1ih7_A_26 - AR
1ih7_A_26 - AR
1ih7_A_50 - AR
1ih7_A_683 - AR
1ih7_A_402 - AR
1ih7_A_683 - AR
1ih7_A_145 - EH
1ih7_A_212 - EH
1ih7_A_269 - EH
1ih7_A_461 - EH
1ih7_A_718 - EH
1ih7_A_781 - EH
1ih7_A_791 - HA
1ih7_A_700 - HA
1ih7_A_707 - HA
1ih7_A_700 - HA
1ih7_A_248 - HA
1ih7_A_4 - HA
1ih7_A_14 - HA
1ih7_A_133 - HA
1ih7_A_110 - HA
1ih7_A_829 - HA
1ih7_A_617 - HA
1ih7_A_110 - HA
1ih7_A_455 - HA
1ih7_A_829 - HA
1ih7_A_659 - HE
1ih7_A_236 - HE
1ih7_A_415 - HE
1ih7_A_439 - HE
1ih7_A_580 - HE
1ih7_A_88 - HE
1ih7_A_803 - HE
1ih7_A_470 - HH
1ih7_A_65 - HH
1ih7_A_164 - HH
1ih7_A_273 - HH
1ih7_A_290 - HH
1ih7_A_340 - HH
1ih7_A_535 - HH
1ih7_A_630 - HH
1ih7_A_644 - HH
1ih7_A_868 - HH
1ih7_A_222 - HH

Homologous structures to 1ih7 classified in ArchDB

1clq A - percentage of sequence identity: 100
1ig9 A - percentage of sequence identity: 99
1noy B - percentage of sequence identity: 62
1noz A - percentage of sequence identity: 62
1noz B - percentage of sequence identity: 62
1q9x A - percentage of sequence identity: 99
1q9x B - percentage of sequence identity: 99
1q9x C - percentage of sequence identity: 99
1q9x D - percentage of sequence identity: 99
1q9y A - percentage of sequence identity: 99
1rv2 A - percentage of sequence identity: 99
1rv2 B - percentage of sequence identity: 99
1rv2 C - percentage of sequence identity: 99
1rv2 D - percentage of sequence identity: 99
1waf A - percentage of sequence identity: 100
1waf B - percentage of sequence identity: 100
1waj - - percentage of sequence identity: 100