PDB: 1kyf Compound: alpha-adaptin c Classification: ENDOCYTOSIS/EXOCYTOSIS Entry date in PDB: 2002-06-12 Resolution [Å]: 1.22 R-Factor: 0.154

CHAIN: A SWISS-PROT/TREMBL: P17427    KEYWORD: 3D-structure    Coated pits    Endocytosis    Golgi stack    Lipid-binding    Protein transport    Transport    SCOP: b.1.10.1 All beta proteins    Immunoglobulin-like beta-sandwich    Clathrin adaptor appendage domain    Alpha-adaptin ear subdomain-like    Alpha-adaptin AP2 ear domain, N-terminal subdomain    Mouse (Mus musculus) SCOP: d.105.1.1 Alpha and beta proteins (a+b)    Subdomain of clathrin and coatomer appendage domain    Subdomain of clathrin and coatomer appendage domain    Clathrin adaptor appendage, alpha and beta chain-specific domain    Alpa-adaptin AP2, C-terminal subdomain    Mouse (Mus musculus) GO:  clathrin coat of trans-Golgi network vesicle    coated pit    structural molecule activity    intracellular protein transport    protein complex assembly    CHAIN: P SWISS-PROT/TREMBL: P42567    KEYWORD: 3D-structure    Calcium-binding    Phosphorylation    Repeat    GO:

Image Source: PDB

Loops in ArchDB40 clusters

1kyf_A_760 - HE => SUBCLASS : 0.1.5
1kyf_A_862 - HE => SUBCLASS : 1.1.1
1kyf_A_862 - HE => SUBCLASS : 1.1.6
1kyf_A_800 - HA => SUBCLASS : 2.1.1
1kyf_A_887 - HA => SUBCLASS : 2.2.1
1kyf_A_714 - HA => SUBCLASS : 2.2.5
1kyf_A_722 - HA => SUBCLASS : 2.3.1
1kyf_A_899 - HA => SUBCLASS : 4.1.1
1kyf_A_750 - EH => SUBCLASS : 1.1.5
1kyf_A_914 - EH => SUBCLASS : 2.1.10

Loops in ArchDB95 clusters

1kyf_A_750 - EH => SUBCLASS : 1.1.3
1kyf_A_914 - EH => SUBCLASS : 2.1.8
1kyf_A_826 - EH => SUBCLASS : 3.7.10
1kyf_A_782 - AR => SUBCLASS : 5.3.3
1kyf_A_760 - HE => SUBCLASS : 0.1.17
1kyf_A_862 - HE => SUBCLASS : 1.1.1
1kyf_A_862 - HE => SUBCLASS : 1.2.2
1kyf_A_800 - HA => SUBCLASS : 2.1.3
1kyf_A_887 - HA => SUBCLASS : 2.2.1
1kyf_A_714 - HA => SUBCLASS : 2.2.5
1kyf_A_722 - HA => SUBCLASS : 2.3.1
1kyf_A_899 - HA => SUBCLASS : 4.1.1

Loops not clustered in ArchDB

1kyf_A_734 - AR
1kyf_A_810 - AR
1kyf_A_849 - EH
1kyf_A_765 - HA
1kyf_A_875 - HA
1kyf_A_833 - HE

1b9k A - percentage of sequence identity: 99
1ky6 A - percentage of sequence identity: 100
1ky7 A - percentage of sequence identity: 100
1kyd A - percentage of sequence identity: 100
1kyu A - percentage of sequence identity: 100
1qtp A - percentage of sequence identity: 100
1qts A - percentage of sequence identity: 100
1w80 A - percentage of sequence identity: 96