PDB: 1l6p Compound: thiol Classification: ELECTRON TRANSPORT Entry date in PDB: 2002-06-12 Resolution [Å]: 1.65 R-Factor: 0.141

CHAIN: A SWISS-PROT/TREMBL: P36655    KEYWORD: 3D-structure    Complete proteome    Cytochrome c-type biogenesis    Electron transport    Inner membrane    NAD    Oxidoreductase    Redox-active center    Signal    Transmembrane    EC: 1.8.1.8 SCOP: b.1.17.1 All beta proteins    Immunoglobulin-like beta-sandwich    Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)    Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)    Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)    Escherichia coli GO:  membrane    electron transporter activity    cytochrome complex assembly    electron transport

Image Source: PDB

Loops in ArchDB40 clusters

1l6p_A_14 - HE => SUBCLASS : 0.1.5
1l6p_A_17 - HA => SUBCLASS : 2.3.1
1l6p_A_102 - HA => SUBCLASS : 3.1.1
1l6p_A_64 - HA => SUBCLASS : 3.2.3
1l6p_A_64 - HA => SUBCLASS : 3.2.5
1l6p_A_28 - AR => SUBCLASS : 3.1.1
1l6p_A_39 - AR => SUBCLASS : 3.4.2
1l6p_A_28 - AR => SUBCLASS : 3.5.1
1l6p_A_39 - AR => SUBCLASS : 4.2.4

Loops in ArchDB95 clusters

1l6p_A_28 - AR => SUBCLASS : 1.1.1
1l6p_A_28 - AR => SUBCLASS : 2.3.1
1l6p_A_39 - AR => SUBCLASS : 3.2.3
1l6p_A_17 - HA => SUBCLASS : 2.3.1
1l6p_A_102 - HA => SUBCLASS : 3.1.1
1l6p_A_64 - HA => SUBCLASS : 3.3.4

Loops in ArchDB-EC clusters

1l6p_A_102 - HA => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1l6p_A_47 - AR
1l6p_A_80 - AR
1l6p_A_72 - AR
1l6p_A_47 - AR
1l6p_A_39 - AR
1l6p_A_28 - AR
1l6p_A_108 - AR
1l6p_A_80 - AR
1l6p_A_72 - AR
1l6p_A_108 - AR
1l6p_A_17 - HA
1l6p_A_64 - HA
1l6p_A_102 - HA

1jpe A - percentage of sequence identity: 100
1jzd C - percentage of sequence identity: 99
1vrs A - percentage of sequence identity: 99
1vrs B - percentage of sequence identity: 99
1vrs C - percentage of sequence identity: 99
1z5y D - percentage of sequence identity: 99