ArchDB - Biological DataBase of Protein Loops

Information on 1lj0

PDB: 1lj0
Compound: cytochrome b5 outer mitochondrial membrane isoform
Classification: ELECTRON TRANSPORT
Entry date in PDB: 2002-11-20
Resolution [Å]: 2.00
R-Factor: 0.207

CHAIN: A

SWISS-PROT/TREMBL: P04166
   KEYWORD: 3D-structure    Electron transport    Heme    Iron    Mitochondrion    Outer membrane    Transmembrane
SCOP: d.120.1.1 Alpha and beta proteins (a+b)    Cytochrome b5-like heme/steroid binding domain    Cytochrome b5-like heme/steroid binding domain    Cytochrome b5    Cytochrome b5    Rat (Rattus norvegicus)
GO:

CHAIN: B

CHAIN: C

CHAIN: D

Image Source: PDB

Stored Loops of 1lj0

Loops in ArchDB95 clusters

1lj0_A_28 - EH => SUBCLASS : 11.5.1
1lj0_A_65 - HE => SUBCLASS : 0.1.8
1lj0_A_65 - HE => SUBCLASS : 0.1.22
1lj0_A_9 - HE => SUBCLASS : 0.1.36
1lj0_A_20 - HA => SUBCLASS : 2.1.1
1lj0_A_16 - HA => SUBCLASS : 2.2.12

Loops not clustered in ArchDB

1lj0_A_6 - EH
1lj0_A_44 - HH
1lj0_A_55 - HH

Homologous structures to 1lj0 classified in ArchDB

1aqa - - percentage of sequence identity: 68
1aw3 - - percentage of sequence identity: 68
1awp A - percentage of sequence identity: 91
1awp B - percentage of sequence identity: 91
1axx - - percentage of sequence identity: 68
1b5a - - percentage of sequence identity: 68
1b5b - - percentage of sequence identity: 68
1b5m - - percentage of sequence identity: 94
1bfx - - percentage of sequence identity: 66
1blv A - percentage of sequence identity: 68
1cyo - - percentage of sequence identity: 70
1do9 A - percentage of sequence identity: 68
1ehb A - percentage of sequence identity: 70
1es1 A - percentage of sequence identity: 69
1eue A - percentage of sequence identity: 91
1eue B - percentage of sequence identity: 91
1f03 A - percentage of sequence identity: 65
1f04 A - percentage of sequence identity: 65
1hko A - percentage of sequence identity: 69
1i5u A - percentage of sequence identity: 66
1i87 A - percentage of sequence identity: 66
1i8c A - percentage of sequence identity: 66
1ib7 A - percentage of sequence identity: 67
1icc A - percentage of sequence identity: 97
1icc B - percentage of sequence identity: 97
1icc C - percentage of sequence identity: 97
1icc D - percentage of sequence identity: 97
1iet - - percentage of sequence identity: 66
1ieu - - percentage of sequence identity: 66
1j0q A - percentage of sequence identity: 69
1jex A - percentage of sequence identity: 67
1lj0 A - percentage of sequence identity: 100
1lj0 B - percentage of sequence identity: 100
1lj0 C - percentage of sequence identity: 100
1lj0 D - percentage of sequence identity: 100
1lqx A - percentage of sequence identity: 69
1lr6 A - percentage of sequence identity: 69
1m20 A - percentage of sequence identity: 69
1m2i A - percentage of sequence identity: 67
1m2m A - percentage of sequence identity: 65
1m59 A - percentage of sequence identity: 69
1mny A - percentage of sequence identity: 68
1nx7 A - percentage of sequence identity: 70
1sh4 A - percentage of sequence identity: 69
1u9m A - percentage of sequence identity: 69
1u9m B - percentage of sequence identity: 69
1u9m C - percentage of sequence identity: 69
1u9m D - percentage of sequence identity: 69
1u9m E - percentage of sequence identity: 69
1u9m F - percentage of sequence identity: 69
1u9u A - percentage of sequence identity: 69
2axx - - percentage of sequence identity: 68