PDB: 1lst Compound: Lysine-, arginine-, ornithine-binding protein (lao Classification: AMINO-ACID BINDING PROTEIN Entry date in PDB: 1994-06-22 Resolution [Å]: 1.80 R-Factor: 0.165

CHAIN: - SWISS-PROT/TREMBL: P02911    KEYWORD: 3D-structure    Amino-acid transport    Complete proteome    Periplasmic    Signal    Transport    SCOP: c.94.1.1 Alpha and beta proteins (a/b)    Periplasmic binding protein-like II    Periplasmic binding protein-like II    Phosphate binding protein-like    Lysine-,arginine-,ornithine-binding (LAO) protein    Salmonella typhimurium GO:  periplasmic space (sensu Gram-negative Bacteria)    transporter activity    transport

Image Source: PDB

Loops in ArchDB40 clusters

1lst_*_75 - HE => SUBCLASS : 0.1.9
1lst_*_29 - HE => SUBCLASS : 1.1.1
1lst_*_29 - HE => SUBCLASS : 1.1.4
1lst_*_121 - HE => SUBCLASS : 2.1.12
1lst_*_106 - HE => SUBCLASS : 2.7.1
1lst_*_143 - HE => SUBCLASS : 4.2.1
1lst_*_55 - HE => SUBCLASS : 4.2.1
1lst_*_19 - HA => SUBCLASS : 3.1.1
1lst_*_44 - EH => SUBCLASS : 1.1.10
1lst_*_44 - EH => SUBCLASS : 1.1.17
1lst_*_26 - EH => SUBCLASS : 1.2.7
1lst_*_136 - EH => SUBCLASS : 2.1.1
1lst_*_198 - EH => SUBCLASS : 3.1.1
1lst_*_113 - EH => SUBCLASS : 3.10.3
1lst_*_113 - EH => SUBCLASS : 3.10.5
1lst_*_198 - EH => SUBCLASS : 4.5.1
1lst_*_204 - HH => SUBCLASS : 1.3.1

Loops in ArchDB95 clusters

1lst_*_44 - EH => SUBCLASS : 1.1.36
1lst_*_136 - EH => SUBCLASS : 2.1.1
1lst_*_198 - EH => SUBCLASS : 3.2.3
1lst_*_113 - EH => SUBCLASS : 3.16.1
1lst_*_198 - EH => SUBCLASS : 4.1.2
1lst_*_204 - HH => SUBCLASS : 1.3.1
1lst_*_75 - HE => SUBCLASS : 0.1.4
1lst_*_29 - HE => SUBCLASS : 1.1.1
1lst_*_29 - HE => SUBCLASS : 1.2.2
1lst_*_121 - HE => SUBCLASS : 3.5.7
1lst_*_106 - HE => SUBCLASS : 3.8.1
1lst_*_106 - HE => SUBCLASS : 3.13.1
1lst_*_143 - HE => SUBCLASS : 4.2.1
1lst_*_55 - HE => SUBCLASS : 4.2.1
1lst_*_162 - HE => SUBCLASS : 6.32.1
1lst_*_19 - HA => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1lst_*_5 - AR
1lst_*_82 - AR
1lst_*_66 - EH
1lst_*_92 - EH
1lst_*_157 - EH
1lst_*_178 - EH
1lst_*_188 - HE

1hpb P - percentage of sequence identity: 70
1hsl B - percentage of sequence identity: 70
1laf E - percentage of sequence identity: 100
1lag E - percentage of sequence identity: 100
1lah E - percentage of sequence identity: 100
2lao - - percentage of sequence identity: 100