PDB: 1nyr Compound: threonyl-trna synthetase 1 Classification: LIGASE Entry date in PDB: 2003-10-28 Resolution [Å]: 2.80 R-Factor: 0.239

CHAIN: A SWISS-PROT/TREMBL: Q8NW68    KEYWORD: Aminoacyl-tRNA synthetase    ATP-binding    Complete proteome    Ligase    Metal-binding    Protein biosynthesis    Zinc    EC: 6.1.1.3 SCOP: c.51.1.1 Alpha and beta proteins (a/b)    Anticodon-binding domain-like    Anticodon-binding domain of Class II aaRS    Anticodon-binding domain of Class II aaRS    Threonyl-tRNA synthetase (ThrRS), C-terminal domain    Staphylococcus aureus SCOP: d.15.10.1 Alpha and beta proteins (a+b)    beta-Grasp (ubiquitin-like)    TGS-like    TGS domain    Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain    Staphylococcus aureus SCOP: d.67.1.1 Alpha and beta proteins (a+b)    RRF/tRNA synthetase additional domain-like    ThrRS/AlaRS common domain    Threonyl-tRNA synthetase (ThrRS), second 'additional' domain    Threonyl-tRNA synthetase (ThrRS), second 'additional' domain    Staphylococcus aureus SCOP: d.104.1.1 Alpha and beta proteins (a+b)    Class II aaRS and biotin synthetases    Class II aaRS and biotin synthetases    Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain    Threonyl-tRNA synthetase (ThrRS)    Staphylococcus aureus GO:  ATP binding    electron transporter activity    iron ion binding    threonine-tRNA ligase activity    tRNA ligase activity    electron transport    protein biosynthesis    threonyl-tRNA aminoacylation    tRNA aminoacylation for protein translation    CHAIN: B SWISS-PROT/TREMBL: Q8NW68    KEYWORD: Aminoacyl-tRNA synthetase    ATP-binding    Complete proteome    Ligase    Metal-binding    Protein biosynthesis    Zinc    EC: 6.1.1.3 SCOP: c.51.1.1 Alpha and beta proteins (a/b)    Anticodon-binding domain-like    Anticodon-binding domain of Class II aaRS    Anticodon-binding domain of Class II aaRS    Threonyl-tRNA synthetase (ThrRS), C-terminal domain    Staphylococcus aureus SCOP: d.15.10.1 Alpha and beta proteins (a+b)    beta-Grasp (ubiquitin-like)    TGS-like    TGS domain    Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain    Staphylococcus aureus SCOP: d.67.1.1 Alpha and beta proteins (a+b)    RRF/tRNA synthetase additional domain-like    ThrRS/AlaRS common domain    Threonyl-tRNA synthetase (ThrRS), second 'additional' domain    Threonyl-tRNA synthetase (ThrRS), second 'additional' domain    Staphylococcus aureus SCOP: d.104.1.1 Alpha and beta proteins (a+b)    Class II aaRS and biotin synthetases    Class II aaRS and biotin synthetases    Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain    Threonyl-tRNA synthetase (ThrRS)    Staphylococcus aureus GO:  ATP binding    electron transporter activity    iron ion binding    threonine-tRNA ligase activity    tRNA ligase activity    electron transport    protein biosynthesis    threonyl-tRNA aminoacylation    tRNA aminoacylation for protein translation

Image Source: PDB

Loops in ArchDB-EC clusters

1nyr_A_302 - HH => SUBCLASS : 1.3.1

Loops not clustered in ArchDB

1nyr_A_177 - AR
1nyr_A_45 - AR
1nyr_A_510 - AR
1nyr_A_93 - AR
1nyr_A_461 - AR
1nyr_A_290 - AR
1nyr_A_625 - EH
1nyr_A_599 - EH
1nyr_A_576 - EH
1nyr_A_548 - EH
1nyr_A_514 - EH
1nyr_A_484 - EH
1nyr_A_103 - EH
1nyr_A_136 - EH
1nyr_A_213 - EH
1nyr_A_260 - EH
1nyr_A_298 - EH
1nyr_A_327 - EH
1nyr_A_380 - EH
1nyr_A_418 - EH
1nyr_A_61 - EH
1nyr_A_99 - HA
1nyr_A_170 - HA
1nyr_A_194 - HA
1nyr_A_253 - HA
1nyr_A_355 - HA
1nyr_A_471 - HA
1nyr_A_503 - HA
1nyr_A_612 - HA
1nyr_A_39 - HA
1nyr_A_321 - HA
1nyr_A_31 - HE
1nyr_A_309 - HE
1nyr_A_437 - HE
1nyr_A_268 - HE
1nyr_A_243 - HE
1nyr_A_154 - HE
1nyr_A_119 - HE
1nyr_A_67 - HE
1nyr_A_336 - HE
1nyr_A_395 - HE
1nyr_A_495 - HE
1nyr_A_524 - HE
1nyr_A_555 - HE
1nyr_A_585 - HE
1nyr_A_605 - HE
1nyr_A_225 - HH
1nyr_A_145 - HH
1nyr_A_22 - HH

1nyq A - percentage of sequence identity: 100
1nyq B - percentage of sequence identity: 100
1nyr A - percentage of sequence identity: 100
1nyr B - percentage of sequence identity: 100