ArchDB - Biological DataBase of Protein Loops

Information on 1o04

PDB: 1o04
Compound: aldehyde dehydrogenase, mitochondrial precursor
Classification: OXIDOREDUCTASE
Entry date in PDB: 2003-06-24
Resolution [Å]: 1.42
R-Factor: 0.147

CHAIN: A

SWISS-PROT/TREMBL: P05091
   KEYWORD: 3D-structure    Mitochondrion    NAD    Oxidoreductase    Polymorphism    Transit peptide
EC: 1.2.1.3
SCOP: c.82.1.1 Alpha and beta proteins (a/b)    ALDH-like    ALDH-like    ALDH-like    Aldehyde reductase (dehydrogenase), ALDH    Human (Homo sapiens), mitochondrial
GO:  oxidoreductase activity    metabolism

CHAIN: B

CHAIN: C

CHAIN: D

CHAIN: E

CHAIN: F

CHAIN: G

CHAIN: H

Image Source: PDB

Stored Loops of 1o04

Loops in ArchDB40 clusters

1o04_A_171 - HE => SUBCLASS : 1.1.1
1o04_A_347 - HE => SUBCLASS : 2.1.2
1o04_A_436 - HE => SUBCLASS : 4.26.1
1o04_A_228 - HE => SUBCLASS : 5.8.3
1o04_A_22 - HA => SUBCLASS : 2.1.1
1o04_A_36 - HA => SUBCLASS : 4.1.2
1o04_A_305 - EH => SUBCLASS : 0.1.75
1o04_A_404 - EH => SUBCLASS : 2.1.1
1o04_A_428 - EH => SUBCLASS : 2.1.5
1o04_A_240 - EH => SUBCLASS : 2.5.2
1o04_A_46 - EH => SUBCLASS : 3.3.2
1o04_A_46 - EH => SUBCLASS : 3.8.9
1o04_A_273 - EH => SUBCLASS : 4.2.1
1o04_A_188 - EH => SUBCLASS : 5.32.2
1o04_A_150 - AR => SUBCLASS : 2.6.1
1o04_A_75 - HH => SUBCLASS : 2.1.1
1o04_A_99 - HH => SUBCLASS : 3.1.1
1o04_A_99 - HH => SUBCLASS : 3.9.1

Loops in ArchDB-EC clusters

1o04_A_56 - HH => SUBCLASS : 4.26.1

Loops not clustered in ArchDB

1o04_A_472 - AR
1o04_A_450 - AR
1o04_A_264 - AR
1o04_A_150 - AR
1o04_A_27 - AR
1o04_A_472 - AR
1o04_A_264 - AR
1o04_A_27 - AR
1o04_A_366 - HA
1o04_A_143 - HA
1o04_A_36 - HA
1o04_A_22 - HA
1o04_A_366 - HA
1o04_A_394 - HE
1o04_A_283 - HE
1o04_A_199 - HE
1o04_A_114 - HH
1o04_A_312 - HH
1o04_A_81 - HH

Homologous structures to 1o04 classified in ArchDB

1a4z A - percentage of sequence identity: 93
1a4z B - percentage of sequence identity: 93
1a4z C - percentage of sequence identity: 93
1a4z D - percentage of sequence identity: 93
1ag8 A - percentage of sequence identity: 93
1ag8 B - percentage of sequence identity: 93
1ag8 C - percentage of sequence identity: 93
1ag8 D - percentage of sequence identity: 93
1bi9 A - percentage of sequence identity: 67
1bi9 B - percentage of sequence identity: 67
1bi9 C - percentage of sequence identity: 67
1bi9 D - percentage of sequence identity: 67
1bxs A - percentage of sequence identity: 67
1bxs B - percentage of sequence identity: 67
1bxs C - percentage of sequence identity: 67
1bxs D - percentage of sequence identity: 67
1cw3 A - percentage of sequence identity: 99
1cw3 B - percentage of sequence identity: 99
1cw3 C - percentage of sequence identity: 99
1cw3 D - percentage of sequence identity: 99
1cw3 E - percentage of sequence identity: 99
1cw3 F - percentage of sequence identity: 99
1cw3 G - percentage of sequence identity: 99
1cw3 H - percentage of sequence identity: 99
1nzw A - percentage of sequence identity: 100
1nzw B - percentage of sequence identity: 100
1nzw C - percentage of sequence identity: 100
1nzw D - percentage of sequence identity: 100
1nzw E - percentage of sequence identity: 100
1nzw F - percentage of sequence identity: 100
1nzw G - percentage of sequence identity: 100
1nzw H - percentage of sequence identity: 100
1nzx A - percentage of sequence identity: 99
1nzx B - percentage of sequence identity: 99
1nzx C - percentage of sequence identity: 99
1nzx D - percentage of sequence identity: 99
1nzx E - percentage of sequence identity: 99
1nzx F - percentage of sequence identity: 99
1nzx G - percentage of sequence identity: 99
1nzx H - percentage of sequence identity: 99
1nzz A - percentage of sequence identity: 99
1nzz B - percentage of sequence identity: 99
1nzz C - percentage of sequence identity: 99
1nzz D - percentage of sequence identity: 99
1nzz E - percentage of sequence identity: 99
1nzz F - percentage of sequence identity: 99
1nzz G - percentage of sequence identity: 99
1nzz H - percentage of sequence identity: 99
1o00 A - percentage of sequence identity: 99
1o00 B - percentage of sequence identity: 99
1o00 C - percentage of sequence identity: 99
1o00 D - percentage of sequence identity: 99
1o00 E - percentage of sequence identity: 99
1o00 F - percentage of sequence identity: 99
1o00 G - percentage of sequence identity: 99
1o00 H - percentage of sequence identity: 99
1o01 A - percentage of sequence identity: 99
1o01 B - percentage of sequence identity: 99
1o01 C - percentage of sequence identity: 99
1o01 D - percentage of sequence identity: 99
1o01 E - percentage of sequence identity: 99
1o01 F - percentage of sequence identity: 99
1o01 G - percentage of sequence identity: 99
1o01 H - percentage of sequence identity: 99
1o02 A - percentage of sequence identity: 99
1o02 B - percentage of sequence identity: 99
1o02 C - percentage of sequence identity: 99
1o02 D - percentage of sequence identity: 99
1o02 E - percentage of sequence identity: 99
1o02 F - percentage of sequence identity: 99
1o02 G - percentage of sequence identity: 99
1o02 H - percentage of sequence identity: 99
1o04 A - percentage of sequence identity: 100
1o04 B - percentage of sequence identity: 100
1o04 C - percentage of sequence identity: 100
1o04 D - percentage of sequence identity: 100
1o04 E - percentage of sequence identity: 100
1o04 F - percentage of sequence identity: 100
1o04 G - percentage of sequence identity: 100
1o04 H - percentage of sequence identity: 100
1o05 A - percentage of sequence identity: 99
1o05 B - percentage of sequence identity: 99
1o05 C - percentage of sequence identity: 99
1o05 D - percentage of sequence identity: 99
1o05 E - percentage of sequence identity: 99
1o05 F - percentage of sequence identity: 99
1o05 G - percentage of sequence identity: 99
1o05 H - percentage of sequence identity: 99
1o9j A - percentage of sequence identity: 65
1o9j B - percentage of sequence identity: 65
1o9j C - percentage of sequence identity: 65
1o9j D - percentage of sequence identity: 65
1of7 A - percentage of sequence identity: 99
1of7 B - percentage of sequence identity: 99
1of7 C - percentage of sequence identity: 99
1of7 D - percentage of sequence identity: 99
1of7 E - percentage of sequence identity: 99
1of7 F - percentage of sequence identity: 99
1of7 G - percentage of sequence identity: 99
1of7 H - percentage of sequence identity: 99
1zum A - percentage of sequence identity: 99
1zum B - percentage of sequence identity: 99
1zum C - percentage of sequence identity: 99
1zum D - percentage of sequence identity: 99
1zum E - percentage of sequence identity: 99
1zum F - percentage of sequence identity: 99
1zum G - percentage of sequence identity: 99
1zum H - percentage of sequence identity: 99
1zum I - percentage of sequence identity: 99
1zum J - percentage of sequence identity: 99
1zum K - percentage of sequence identity: 99
1zum L - percentage of sequence identity: 99