PDB: 1o7f Compound: camp-dependent rap1 guanine-nucleotide exchange fa Classification: REGULATION Entry date in PDB: 2002-11-11 Resolution [Å]: 2.50 R-Factor: 0.244

CHAIN: A SWISS-PROT/TREMBL: Q9EQZ6    KEYWORD: 3D-structure    Alternative promoter usage    Alternative splicing    cAMP-binding    Exocytosis    Guanine-nucleotide releasing factor    Repeat    SCOP: a.4.5.31 All alpha proteins    DNA/RNA-binding 3-helical bundle    "Winged helix" DNA-binding domain    DEP domain    Regulatory domain of epac2, domain 2    Mouse (Mus musculus) SCOP: b.82.3.2 All beta proteins    Double-stranded beta-helix    cAMP-binding domain-like    cAMP-binding domain    Regulatory domain of Epac2, domains 1 and 3    Mouse (Mus musculus) SCOP: b.82.3.2 All beta proteins    Double-stranded beta-helix    cAMP-binding domain-like    cAMP-binding domain    Regulatory domain of Epac2, domains 1 and 3    Mouse (Mus musculus) GO:

Image Source: PDB

Loops in ArchDB40 clusters

1o7f_A_49 - HE => SUBCLASS : 0.1.1
1o7f_A_344 - HE => SUBCLASS : 0.1.2
1o7f_A_49 - HE => SUBCLASS : 1.2.2
1o7f_A_344 - HE => SUBCLASS : 1.2.2
1o7f_A_237 - HE => SUBCLASS : 2.4.1
1o7f_A_383 - HA => SUBCLASS : 3.6.2
1o7f_A_205 - HA => SUBCLASS : 3.25.1
1o7f_A_133 - EH => SUBCLASS : 0.1.6
1o7f_A_126 - AR => SUBCLASS : 1.1.2
1o7f_A_417 - AR => SUBCLASS : 2.7.2
1o7f_A_60 - AR => SUBCLASS : 3.1.1
1o7f_A_355 - AR => SUBCLASS : 3.1.2
1o7f_A_126 - AR => SUBCLASS : 3.2.6
1o7f_A_392 - AR => SUBCLASS : 3.3.1
1o7f_A_69 - AR => SUBCLASS : 4.1.3
1o7f_A_365 - AR => SUBCLASS : 4.1.3
1o7f_A_102 - AR => SUBCLASS : 4.4.1
1o7f_A_355 - AR => SUBCLASS : 4.11.1
1o7f_A_295 - HH => SUBCLASS : 7.4.1
1o7f_A_323 - HH => SUBCLASS : 8.6.1
1o7f_A_28 - HH => SUBCLASS : 8.6.1

Loops in ArchDB95 clusters

1o7f_A_133 - EH => SUBCLASS : 0.1.5
1o7f_A_60 - AR => SUBCLASS : 1.1.1
1o7f_A_392 - AR => SUBCLASS : 1.1.4
1o7f_A_126 - AR => SUBCLASS : 1.2.7
1o7f_A_102 - AR => SUBCLASS : 2.3.1
1o7f_A_392 - AR => SUBCLASS : 3.3.1
1o7f_A_355 - AR => SUBCLASS : 3.5.1
1o7f_A_365 - AR => SUBCLASS : 4.1.2
1o7f_A_69 - AR => SUBCLASS : 4.1.2
1o7f_A_102 - AR => SUBCLASS : 4.2.1
1o7f_A_355 - AR => SUBCLASS : 4.10.1
1o7f_A_417 - AR => SUBCLASS : 4.32.1
1o7f_A_323 - HH => SUBCLASS : 8.22.1
1o7f_A_28 - HH => SUBCLASS : 8.22.1
1o7f_A_49 - HE => SUBCLASS : 0.1.1
1o7f_A_344 - HE => SUBCLASS : 1.4.1
1o7f_A_237 - HE => SUBCLASS : 2.4.1
1o7f_A_205 - HA => SUBCLASS : 3.18.1
1o7f_A_383 - HA => SUBCLASS : 4.17.1
1o7f_A_88 - HA => SUBCLASS : 7.12.1

Loops not clustered in ArchDB

1o7f_A_79 - AR
1o7f_A_112 - AR
1o7f_A_375 - AR
1o7f_A_402 - AR
1o7f_A_425 - EH
1o7f_A_268 - EH
1o7f_A_213 - EH
1o7f_A_253 - HA
1o7f_A_184 - HE
1o7f_A_14 - HH
1o7f_A_140 - HH
1o7f_A_220 - HH
1o7f_A_285 - HH

2byv E - percentage of sequence identity: 100