PDB: 1ogc Compound: high affinity ribose transport protein rbsd Classification: TRANSPORT Entry date in PDB: 2003-09-01 Resolution [Å]: 2.00 R-Factor: 0.202

CHAIN: A SWISS-PROT/TREMBL: P36946    KEYWORD: 3D-structure    Complete proteome    Membrane    Sugar transport    Transport    SCOP: c.133.1.1 Alpha and beta proteins (a/b)    Ribose transport protein RbsD    Ribose transport protein RbsD    Ribose transport protein RbsD    Ribose transport protein RbsD    Bacillus subtilis GO:  carbohydrate transport    CHAIN: B SWISS-PROT/TREMBL: P36946    KEYWORD: 3D-structure    Complete proteome    Membrane    Sugar transport    Transport    SCOP: c.133.1.1 Alpha and beta proteins (a/b)    Ribose transport protein RbsD    Ribose transport protein RbsD    Ribose transport protein RbsD    Ribose transport protein RbsD    Bacillus subtilis GO:  carbohydrate transport    CHAIN: C SWISS-PROT/TREMBL: P36946    KEYWORD: 3D-structure    Complete proteome    Membrane    Sugar transport    Transport    SCOP: c.133.1.1 Alpha and beta proteins (a/b)    Ribose transport protein RbsD    Ribose transport protein RbsD    Ribose transport protein RbsD    Ribose transport protein RbsD    Bacillus subtilis GO:  carbohydrate transport    CHAIN: D SWISS-PROT/TREMBL: P36946    KEYWORD: 3D-structure    Complete proteome    Membrane    Sugar transport    Transport    SCOP: c.133.1.1 Alpha and beta proteins (a/b)    Ribose transport protein RbsD    Ribose transport protein RbsD    Ribose transport protein RbsD    Ribose transport protein RbsD    Bacillus subtilis GO:  carbohydrate transport    CHAIN: E SWISS-PROT/TREMBL: P36946    KEYWORD: 3D-structure    Complete proteome    Membrane    Sugar transport    Transport    SCOP: c.133.1.1 Alpha and beta proteins (a/b)    Ribose transport protein RbsD    Ribose transport protein RbsD    Ribose transport protein RbsD    Ribose transport protein RbsD    Bacillus subtilis GO:  carbohydrate transport

Image Source: PDB

Loops in ArchDB40 clusters

1ogc_A_98 - HE => SUBCLASS : 2.3.2
1ogc_A_51 - HE => SUBCLASS : 2.6.2
1ogc_A_78 - HE => SUBCLASS : 3.4.4
1ogc_A_9 - HE => SUBCLASS : 5.16.1
1ogc_A_64 - EH => SUBCLASS : 0.1.12
1ogc_A_92 - EH => SUBCLASS : 1.1.1
1ogc_A_72 - HH => SUBCLASS : 1.2.1

Loops in ArchDB95 clusters

1ogc_A_64 - EH => SUBCLASS : 0.1.3
1ogc_A_92 - EH => SUBCLASS : 1.1.1
1ogc_A_72 - HH => SUBCLASS : 1.2.1
1ogc_A_51 - HE => SUBCLASS : 2.6.1
1ogc_A_78 - HE => SUBCLASS : 4.1.3
1ogc_A_9 - HE => SUBCLASS : 5.5.1

Loops not clustered in ArchDB

1ogc_A_23 - AR
1ogc_A_111 - AR
1ogc_A_39 - EH

1ogc A - percentage of sequence identity: 100
1ogc B - percentage of sequence identity: 100
1ogc C - percentage of sequence identity: 100
1ogc D - percentage of sequence identity: 100
1ogc E - percentage of sequence identity: 100
1ogd A - percentage of sequence identity: 100
1ogd B - percentage of sequence identity: 100
1ogd C - percentage of sequence identity: 100
1ogd D - percentage of sequence identity: 100
1ogd E - percentage of sequence identity: 100
1oge A - percentage of sequence identity: 100
1oge B - percentage of sequence identity: 100
1oge C - percentage of sequence identity: 100
1oge D - percentage of sequence identity: 100
1oge E - percentage of sequence identity: 100
1ogf A - percentage of sequence identity: 100
1ogf B - percentage of sequence identity: 100
1ogf C - percentage of sequence identity: 100
1ogf D - percentage of sequence identity: 100
1ogf E - percentage of sequence identity: 100