PDB: 1pwb Compound: pulmonary surfactant-associated protein d Classification: SIGNALING PROTEIN Entry date in PDB: 2003-08-05 Resolution [Å]: 1.40 R-Factor: 0.205

CHAIN: A SWISS-PROT/TREMBL: P35247    KEYWORD: 3D-structure    Calcium    Coiled coil    Collagen    Gaseous exchange    Glycoprotein    Hydroxylation    Lectin    Repeat    Signal    Surface film    SCOP: d.169.1.1 Alpha and beta proteins (a+b)    C-type lectin-like    C-type lectin-like    C-type lectin domain    Surfactant protein, lectin domain    Human (Homo sapiens), SP-D SCOP: h.1.1.1 Coiled coil proteins    Parallel coiled-coil    Triple coiled coil domain of C-type lectins    Triple coiled coil domain of C-type lectins    Surfactant protein    Human (Homo sapiens), SP-D GO:  cytoplasm    sugar binding    phosphate transport    CHAIN: B SWISS-PROT/TREMBL: P35247    KEYWORD: 3D-structure    Calcium    Coiled coil    Collagen    Gaseous exchange    Glycoprotein    Hydroxylation    Lectin    Repeat    Signal    Surface film    SCOP: d.169.1.1 Alpha and beta proteins (a+b)    C-type lectin-like    C-type lectin-like    C-type lectin domain    Surfactant protein, lectin domain    Human (Homo sapiens), SP-D SCOP: h.1.1.1 Coiled coil proteins    Parallel coiled-coil    Triple coiled coil domain of C-type lectins    Triple coiled coil domain of C-type lectins    Surfactant protein    Human (Homo sapiens), SP-D GO:  cytoplasm    sugar binding    phosphate transport    CHAIN: C SWISS-PROT/TREMBL: P35247    KEYWORD: 3D-structure    Calcium    Coiled coil    Collagen    Gaseous exchange    Glycoprotein    Hydroxylation    Lectin    Repeat    Signal    Surface film    SCOP: d.169.1.1 Alpha and beta proteins (a+b)    C-type lectin-like    C-type lectin-like    C-type lectin domain    Surfactant protein, lectin domain    Human (Homo sapiens), SP-D SCOP: h.1.1.1 Coiled coil proteins    Parallel coiled-coil    Triple coiled coil domain of C-type lectins    Triple coiled coil domain of C-type lectins    Surfactant protein    Human (Homo sapiens), SP-D GO:  cytoplasm    sugar binding    phosphate transport

Image Source: PDB

Loops in ArchDB40 clusters

1pwb_A_274 - HE => SUBCLASS : 1.1.2
1pwb_A_254 - HE => SUBCLASS : 1.1.6
1pwb_A_237 - HA => SUBCLASS : 2.3.15
1pwb_A_331 - HA => SUBCLASS : 3.1.1
1pwb_A_267 - EH => SUBCLASS : 5.10.1
1pwb_A_340 - AR => SUBCLASS : 3.7.1
1pwb_A_340 - AR => SUBCLASS : 4.3.1

Loops in ArchDB95 clusters

1pwb_A_267 - EH => SUBCLASS : 5.7.1
1pwb_A_340 - AR => SUBCLASS : 2.2.1
1pwb_A_254 - HE => SUBCLASS : 1.2.2
1pwb_A_274 - HE => SUBCLASS : 1.2.3
1pwb_A_274 - HE => SUBCLASS : 2.1.2
1pwb_A_274 - HE => SUBCLASS : 3.2.1
1pwb_A_237 - HA => SUBCLASS : 2.3.4
1pwb_A_237 - HA => SUBCLASS : 2.3.8
1pwb_A_331 - HA => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1pwb_A_243 - EH
1pwb_A_291 - HA
1pwb_A_206 - HE

1b08 A - percentage of sequence identity: 96
1b08 B - percentage of sequence identity: 96
1b08 C - percentage of sequence identity: 96
1m7l A - percentage of sequence identity: 100
1m7l B - percentage of sequence identity: 100
1m7l C - percentage of sequence identity: 100
1pw9 A - percentage of sequence identity: 100
1pw9 B - percentage of sequence identity: 100
1pw9 C - percentage of sequence identity: 100
1pwb A - percentage of sequence identity: 100
1pwb B - percentage of sequence identity: 100
1pwb C - percentage of sequence identity: 100