PDB: 1q0s Compound: DNA adenine methylase Classification: TRANSFERASE Entry date in PDB: 2003-09-23 Resolution [Å]: 2.30 R-Factor: 0.222

CHAIN: A SWISS-PROT/TREMBL: P04392    KEYWORD: DNA replication    Methyltransferase    Transferase    EC: 2.1.1.72 SCOP: c.66.1.28 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    N6 adenine-specific DNA methylase, DAM    DNA methylase T4DAM    Bacteriophage T4 GO:  DNA binding    N-methyltransferase activity    DNA methylation

Image Source: PDB

Loops in ArchDB40 clusters

1q0s_A_134 - HE => SUBCLASS : 0.1.8
1q0s_A_222 - HE => SUBCLASS : 0.1.37
1q0s_A_134 - HE => SUBCLASS : 0.1.42
1q0s_A_187 - HE => SUBCLASS : 1.1.2
1q0s_A_187 - HE => SUBCLASS : 2.1.1
1q0s_A_46 - EH => SUBCLASS : 2.1.2
1q0s_A_46 - EH => SUBCLASS : 2.1.3
1q0s_A_53 - HH => SUBCLASS : 2.1.2
1q0s_A_84 - HH => SUBCLASS : 2.2.1

Loops in ArchDB95 clusters

1q0s_A_46 - EH => SUBCLASS : 2.1.3
1q0s_A_46 - EH => SUBCLASS : 3.3.1
1q0s_A_53 - HH => SUBCLASS : 2.1.2
1q0s_A_53 - HH => SUBCLASS : 2.1.3
1q0s_A_84 - HH => SUBCLASS : 2.2.1
1q0s_A_134 - HE => SUBCLASS : 0.1.15
1q0s_A_222 - HE => SUBCLASS : 0.1.34
1q0s_A_134 - HE => SUBCLASS : 0.1.34
1q0s_A_222 - HE => SUBCLASS : 0.1.43
1q0s_A_222 - HE => SUBCLASS : 0.1.59
1q0s_A_187 - HE => SUBCLASS : 2.1.1
1q0s_A_187 - HE => SUBCLASS : 2.1.2

Loops in ArchDB-EC clusters

1q0s_A_84 - HH => SUBCLASS : 2.2.1

Loops not clustered in ArchDB

1q0s_A_150 - AR
1q0s_A_150 - AR
1q0s_A_166 - EH
1q0s_A_207 - EH
1q0s_A_27 - HA
1q0s_A_231 - HA
1q0s_A_27 - HA
1q0s_A_231 - HA
1q0s_A_15 - HE
1q0s_A_100 - HH
1q0s_A_67 - HH

1q0t A - percentage of sequence identity: 100
1q0t B - percentage of sequence identity: 100
1yf3 A - percentage of sequence identity: 98
1yf3 B - percentage of sequence identity: 98
1yfj A - percentage of sequence identity: 98
1yfj B - percentage of sequence identity: 98
1yfj C - percentage of sequence identity: 98
1yfj D - percentage of sequence identity: 98
1yfj E - percentage of sequence identity: 98
1yfj F - percentage of sequence identity: 98
1yfl A - percentage of sequence identity: 98
1yfl B - percentage of sequence identity: 98
1yfl D - percentage of sequence identity: 98
1yfl E - percentage of sequence identity: 98