PDB: 1q9i Compound: flavocytochrome c3 Classification: OXIDOREDUCTASE Entry date in PDB: 2004-05-04 Resolution [Å]: 1.60 R-Factor: 0.157

CHAIN: A SWISS-PROT/TREMBL: Q02469    KEYWORD: 3D-structure    Electron transport    FAD    Flavoprotein    Heme    Iron    Oxidoreductase    Periplasmic    Signal    EC: 1.3.99.1 SCOP: a.138.1.3 All alpha proteins    Multiheme cytochromes    Multiheme cytochromes    Di-heme elbow motif    Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain    Shewanella frigidimarina SCOP: c.3.1.4 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain    Flavocytochrome c3 (respiratory fumarate reductase)    Shewanella frigidimarina SCOP: c.3.1.4 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain    Flavocytochrome c3 (respiratory fumarate reductase)    Shewanella frigidimarina SCOP: d.168.1.1 Alpha and beta proteins (a+b)    Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain    Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain    Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain    Flavocytochrome c3 (respiratory fumarate reductase)    Shewanella frigidimarina GO:  oxidoreductase activity    succinate dehydrogenase activity    electron transport

Image Source: PDB

Loops in ArchDB40 clusters

1q9i_A_344 - HE => SUBCLASS : 1.1.2
1q9i_A_136 - HE => SUBCLASS : 2.1.1
1q9i_A_378 - HE => SUBCLASS : 2.1.2
1q9i_A_253 - HE => SUBCLASS : 2.1.2
1q9i_A_344 - HE => SUBCLASS : 2.2.5
1q9i_A_432 - HE => SUBCLASS : 2.4.1
1q9i_A_344 - HE => SUBCLASS : 3.2.2
1q9i_A_289 - HA => SUBCLASS : 3.2.1
1q9i_A_276 - HA => SUBCLASS : 4.2.2
1q9i_A_232 - HA => SUBCLASS : 7.1.1
1q9i_A_417 - EH => SUBCLASS : 0.1.2
1q9i_A_443 - EH => SUBCLASS : 2.1.1
1q9i_A_129 - EH => SUBCLASS : 3.2.1
1q9i_A_300 - AR => SUBCLASS : 1.1.3
1q9i_A_125 - AR => SUBCLASS : 1.1.3
1q9i_A_271 - AR => SUBCLASS : 1.2.2
1q9i_A_525 - AR => SUBCLASS : 3.19.1
1q9i_A_356 - AR => SUBCLASS : 4.39.1
1q9i_A_423 - HH => SUBCLASS : 1.1.42
1q9i_A_423 - HH => SUBCLASS : 1.2.11
1q9i_A_447 - HH => SUBCLASS : 3.1.1
1q9i_A_447 - HH => SUBCLASS : 3.9.1
1q9i_A_189 - HH => SUBCLASS : 5.13.2
1q9i_A_178 - HH => SUBCLASS : 5.17.1

Loops in ArchDB95 clusters

1q9i_A_417 - EH => SUBCLASS : 0.1.1
1q9i_A_443 - EH => SUBCLASS : 2.1.1
1q9i_A_443 - EH => SUBCLASS : 2.1.8
1q9i_A_129 - EH => SUBCLASS : 3.5.1
1q9i_A_536 - EH => SUBCLASS : 10.8.1
1q9i_A_386 - EH => SUBCLASS : 13.9.1
1q9i_A_271 - AR => SUBCLASS : 1.1.5
1q9i_A_125 - AR => SUBCLASS : 1.2.1
1q9i_A_300 - AR => SUBCLASS : 1.2.1
1q9i_A_525 - AR => SUBCLASS : 3.19.1
1q9i_A_356 - AR => SUBCLASS : 4.38.1
1q9i_A_152 - AR => SUBCLASS : 15.3.1
1q9i_A_423 - HH => SUBCLASS : 1.2.4
1q9i_A_423 - HH => SUBCLASS : 1.2.6
1q9i_A_447 - HH => SUBCLASS : 3.4.3
1q9i_A_189 - HH => SUBCLASS : 5.22.1
1q9i_A_136 - HE => SUBCLASS : 2.1.1
1q9i_A_344 - HE => SUBCLASS : 2.1.3
1q9i_A_378 - HE => SUBCLASS : 2.5.1
1q9i_A_253 - HE => SUBCLASS : 2.5.1
1q9i_A_432 - HE => SUBCLASS : 2.9.1
1q9i_A_402 - HE => SUBCLASS : 4.64.1
1q9i_A_432 - HE => SUBCLASS : 4.66.1
1q9i_A_206 - HE => SUBCLASS : 5.71.1
1q9i_A_289 - HA => SUBCLASS : 3.3.1
1q9i_A_517 - HA => SUBCLASS : 4.11.3
1q9i_A_276 - HA => SUBCLASS : 5.1.2
1q9i_A_232 - HA => SUBCLASS : 8.10.1

Loops not clustered in ArchDB

1q9i_A_494 - AR
1q9i_A_172 - EH
1q9i_A_244 - EH
1q9i_A_308 - EH
1q9i_A_362 - EH
1q9i_A_509 - HA
1q9i_A_458 - HE
1q9i_A_112 - HE
1q9i_A_4 - HH
1q9i_A_30 - HH
1q9i_A_43 - HH
1q9i_A_320 - HH

1d4c A - percentage of sequence identity: 61
1d4c B - percentage of sequence identity: 61
1d4c C - percentage of sequence identity: 61
1d4c D - percentage of sequence identity: 61
1d4e A - percentage of sequence identity: 61
1jrx A - percentage of sequence identity: 99
1jrx B - percentage of sequence identity: 99
1jry A - percentage of sequence identity: 99
1jry B - percentage of sequence identity: 99
1jrz A - percentage of sequence identity: 99
1jrz B - percentage of sequence identity: 99
1kss A - percentage of sequence identity: 99
1ksu A - percentage of sequence identity: 99
1ksu B - percentage of sequence identity: 99
1lj1 A - percentage of sequence identity: 99
1lj1 B - percentage of sequence identity: 99
1m64 A - percentage of sequence identity: 99
1m64 B - percentage of sequence identity: 99
1p2e A - percentage of sequence identity: 99
1p2h A - percentage of sequence identity: 99
1qjd A - percentage of sequence identity: 99
1y0p A - percentage of sequence identity: 99