PDB: 1qgw Compound: cryptophytan phycoerythrin (alpha-1 chain) Classification: PHOTOSYNTHESIS Entry date in PDB: 1999-05-19 Resolution [Å]: 1.63 R-Factor: 0.149

CHAIN: A SWISS-PROT/TREMBL: Q00433    KEYWORD: 3D-structure    Bile pigment    Chloroplast    Electron transport    Photosynthesis    Phycobilisome    Transit peptide    SCOP: d.184.1.1 Alpha and beta proteins (a+b)    Non-globular alpha+beta subunits of globular proteins    Non-globular alpha+beta subunits of globular proteins    Phycoerythrin 545 alpha-subunits    Phycoerythrin 545 alpha-subunits    Cryptophyte (Rhodomonas sp.), cs24 GO:  phycobilisome    electron transport    photosynthesis    CHAIN: B SWISS-PROT/TREMBL: Q00433    KEYWORD: 3D-structure    Bile pigment    Chloroplast    Electron transport    Photosynthesis    Phycobilisome    Transit peptide    SCOP: d.184.1.1 Alpha and beta proteins (a+b)    Non-globular alpha+beta subunits of globular proteins    Non-globular alpha+beta subunits of globular proteins    Phycoerythrin 545 alpha-subunits    Phycoerythrin 545 alpha-subunits    Cryptophyte (Rhodomonas sp.), cs24 GO:  phycobilisome    electron transport    photosynthesis    CHAIN: C SWISS-PROT/TREMBL: P27198    KEYWORD: 3D-structure    Bile pigment    Chloroplast    Electron transport    Methylation    Photosynthesis    Phycobilisome    SCOP: a.1.1.3 All alpha proteins    Globin-like    Globin-like    Phycocyanin-like phycobilisome proteins    Phycoerythrin beta subunit    Cryptophite (Rhodomonas sp.), cs24 GO:  light-harvesting complex (sensu Viridiplantae)    electron transport    photosynthesis    CHAIN: D SWISS-PROT/TREMBL: P27198    KEYWORD: 3D-structure    Bile pigment    Chloroplast    Electron transport    Methylation    Photosynthesis    Phycobilisome    SCOP: a.1.1.3 All alpha proteins    Globin-like    Globin-like    Phycocyanin-like phycobilisome proteins    Phycoerythrin beta subunit    Cryptophite (Rhodomonas sp.), cs24 GO:  light-harvesting complex (sensu Viridiplantae)    electron transport    photosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1qgw_A_38 - EH => SUBCLASS : 4.13.1
1qgw_A_38 - EH => SUBCLASS : 4.13.3

Loops in ArchDB95 clusters

1qgw_C_76 - HH => SUBCLASS : 2.5.1
1qgw_C_113 - HH => SUBCLASS : 3.1.4
1qgw_C_113 - HH => SUBCLASS : 3.2.5

Loops not clustered in ArchDB

1qgw_B_38 - EH
1qgw_A_7 - HA
1qgw_B_7 - HA
1qgw_C_4 - HH
1qgw_C_22 - HH
1qgw_C_34 - HH
1qgw_C_48 - HH
1qgw_C_103 - HH
1qgw_C_124 - HH

1eyx B - percentage of sequence identity: 75
1qgw A - percentage of sequence identity: 77
1qgw B - percentage of sequence identity: 77
1xf6 A - percentage of sequence identity: 100
1xf6 B - percentage of sequence identity: 77
1xg0 A - percentage of sequence identity: 100
1xg0 B - percentage of sequence identity: 77