ArchDB - Biological DataBase of Protein Loops

Information on 1qks

PDB: 1qks
Compound: cytochrome cd1 nitrite reductase
Classification: OXIDOREDUCTASE
Entry date in PDB: 1999-08-18
Resolution [Å]: 1.28
R-Factor: 0.185

CHAIN: A

SWISS-PROT/TREMBL: P72181
   KEYWORD: 3D-structure    Electron transport    Heme    Oxidoreductase    Periplasmic    Signal
EC: 1.7.2.1
SCOP: a.3.1.2 All alpha proteins    Cytochrome c    Cytochrome c    N-terminal (heme c) domain of cytochrome cd1-nitrite reductase    N-terminal (heme c) domain of cytochrome cd1-nitrite reductase    Paracoccus denitrificans
SCOP: b.70.2.1 All beta proteins    8-bladed beta-propeller    C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase    C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase    C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase    Paracoccus denitrificans
GO:  electron transporter activity    heme binding    nitrite reductase (NO-forming) activity    electron transport

CHAIN: B

Image Source: PDB

Stored Loops of 1qks

Loops in ArchDB-EC clusters

1qks_A_464 - HE => SUBCLASS : 1.3.5

Loops not clustered in ArchDB

1qks_A_375 - AR
1qks_A_375 - AR
1qks_A_431 - AR
1qks_A_540 - AR
1qks_A_147 - AR
1qks_A_189 - AR
1qks_A_278 - AR
1qks_A_232 - AR
1qks_A_294 - AR
1qks_A_335 - AR
1qks_A_540 - AR
1qks_A_335 - AR
1qks_A_431 - AR
1qks_A_147 - AR
1qks_A_278 - AR
1qks_A_232 - AR
1qks_A_453 - EH
1qks_A_365 - HA
1qks_A_344 - HA
1qks_A_321 - HA
1qks_A_311 - HA
1qks_A_300 - HA
1qks_A_355 - HA
1qks_A_393 - HA
1qks_A_401 - HA
1qks_A_413 - HA
1qks_A_445 - HA
1qks_A_470 - HA
1qks_A_504 - HA
1qks_A_516 - HA
1qks_A_530 - HA
1qks_A_286 - HA
1qks_A_210 - HA
1qks_A_267 - HA
1qks_A_321 - HA
1qks_A_257 - HA
1qks_A_241 - HA
1qks_A_393 - HA
1qks_A_413 - HA
1qks_A_470 - HA
1qks_A_219 - HA
1qks_A_178 - HA
1qks_A_199 - HA
1qks_A_168 - HA
1qks_A_219 - HA
1qks_A_257 - HA
1qks_A_241 - HA
1qks_A_492 - HE
1qks_A_51 - HH
1qks_A_66 - HH
1qks_A_13 - HH
1qks_A_117 - HH
1qks_A_91 - HH

Homologous structures to 1qks classified in ArchDB

1aof A - percentage of sequence identity: 100
1aof B - percentage of sequence identity: 100
1aom A - percentage of sequence identity: 100
1aom B - percentage of sequence identity: 100
1aoq A - percentage of sequence identity: 100
1aoq B - percentage of sequence identity: 100
1bl9 A - percentage of sequence identity: 67
1bl9 B - percentage of sequence identity: 67
1dy7 A - percentage of sequence identity: 98
1dy7 B - percentage of sequence identity: 98
1e2r A - percentage of sequence identity: 99
1e2r B - percentage of sequence identity: 99
1gjq A - percentage of sequence identity: 67
1gjq B - percentage of sequence identity: 67
1gq1 A - percentage of sequence identity: 98
1gq1 B - percentage of sequence identity: 98
1h9x A - percentage of sequence identity: 98
1h9x B - percentage of sequence identity: 98
1h9y A - percentage of sequence identity: 98
1h9y B - percentage of sequence identity: 98
1hcm A - percentage of sequence identity: 98
1hcm B - percentage of sequence identity: 98
1hj3 A - percentage of sequence identity: 98
1hj3 B - percentage of sequence identity: 98
1hj4 A - percentage of sequence identity: 98
1hj4 B - percentage of sequence identity: 98
1hj5 A - percentage of sequence identity: 98
1hj5 B - percentage of sequence identity: 98
1hzu A - percentage of sequence identity: 67
1hzv A - percentage of sequence identity: 67
1n15 A - percentage of sequence identity: 67
1n15 B - percentage of sequence identity: 67
1n50 A - percentage of sequence identity: 67
1n50 B - percentage of sequence identity: 67
1n90 A - percentage of sequence identity: 67
1n90 B - percentage of sequence identity: 67
1nir A - percentage of sequence identity: 67
1nir B - percentage of sequence identity: 67
1nno A - percentage of sequence identity: 67
1nno B - percentage of sequence identity: 67
1qks A - percentage of sequence identity: 100
1qks B - percentage of sequence identity: 100