PDB: 1ryo Compound: serotransferrin Classification: METAL TRANSPORT Entry date in PDB: 2004-05-11 Resolution [Å]: 1.20 R-Factor: 0.221

CHAIN: A SWISS-PROT/TREMBL: P02787    KEYWORD: 3D-structure    Disease mutation    Glycoprotein    Iron transport    Metal-binding    Polymorphism    Repeat    Signal    Transport    SCOP: c.94.1.2 Alpha and beta proteins (a/b)    Periplasmic binding protein-like II    Periplasmic binding protein-like II    Transferrin    Transferrin    Human (Homo sapiens) GO:  extracellular region    ferric iron binding    iron ion homeostasis    iron ion transport

Image Source: PDB

Loops in ArchDB40 clusters

1ryo_A_217 - HE => SUBCLASS : 0.1.10
1ryo_A_217 - HE => SUBCLASS : 0.1.47
1ryo_A_187 - HE => SUBCLASS : 4.2.1
1ryo_A_45 - HE => SUBCLASS : 4.2.4
1ryo_A_78 - HA => SUBCLASS : 2.2.1
1ryo_A_223 - HA => SUBCLASS : 3.1.1
1ryo_A_202 - EH => SUBCLASS : 0.1.39
1ryo_A_60 - EH => SUBCLASS : 1.1.2
1ryo_A_36 - EH => SUBCLASS : 2.1.1
1ryo_A_91 - AR => SUBCLASS : 1.1.7
1ryo_A_232 - AR => SUBCLASS : 9.6.1
1ryo_A_311 - HH => SUBCLASS : 1.4.1
1ryo_A_311 - HH => SUBCLASS : 1.4.3
1ryo_A_209 - HH => SUBCLASS : 3.5.1

Loops in ArchDB95 clusters

1ryo_A_202 - EH => SUBCLASS : 0.1.10
1ryo_A_60 - EH => SUBCLASS : 1.1.1
1ryo_A_36 - EH => SUBCLASS : 2.1.1
1ryo_A_299 - EH => SUBCLASS : 6.20.1
1ryo_A_91 - AR => SUBCLASS : 1.2.5
1ryo_A_232 - AR => SUBCLASS : 9.1.1
1ryo_A_311 - HH => SUBCLASS : 1.4.1
1ryo_A_209 - HH => SUBCLASS : 3.6.1
1ryo_A_217 - HE => SUBCLASS : 0.1.18
1ryo_A_187 - HE => SUBCLASS : 4.2.3
1ryo_A_45 - HE => SUBCLASS : 4.2.4
1ryo_A_223 - HA => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1ryo_A_94 - AR
1ryo_A_244 - AR
1ryo_A_250 - EH
1ryo_A_157 - EH
1ryo_A_117 - EH
1ryo_A_5 - EH
1ryo_A_12 - HE
1ryo_A_64 - HE
1ryo_A_146 - HE
1ryo_A_260 - HE
1ryo_A_129 - HH

1a8e - - percentage of sequence identity: 100
1a8f - - percentage of sequence identity: 100
1b3e A - percentage of sequence identity: 99
1bp5 A - percentage of sequence identity: 100
1bp5 B - percentage of sequence identity: 100
1bp5 C - percentage of sequence identity: 100
1bp5 D - percentage of sequence identity: 100
1btj A - percentage of sequence identity: 100
1btj B - percentage of sequence identity: 100
1d3k A - percentage of sequence identity: 99
1d4n A - percentage of sequence identity: 99
1dsn - - percentage of sequence identity: 61
1dtg A - percentage of sequence identity: 99
1eh3 A - percentage of sequence identity: 62
1fqe A - percentage of sequence identity: 99
1fqf A - percentage of sequence identity: 99
1h43 A - percentage of sequence identity: 61
1h44 A - percentage of sequence identity: 61
1hse - - percentage of sequence identity: 61
1jqf A - percentage of sequence identity: 99
1l5t A - percentage of sequence identity: 61
1l5t B - percentage of sequence identity: 61
1lct - - percentage of sequence identity: 61
1lgb C - percentage of sequence identity: 62
1n7w A - percentage of sequence identity: 99
1n7x A - percentage of sequence identity: 99
1n84 A - percentage of sequence identity: 100
1oqg A - percentage of sequence identity: 99
1oqh A - percentage of sequence identity: 99
1suv C - percentage of sequence identity: 100
1suv D - percentage of sequence identity: 100
1tfd - - percentage of sequence identity: 82
1vfd - - percentage of sequence identity: 61
1vfe - - percentage of sequence identity: 61