PDB: 1vic Compound: 3-deoxy-manno-octulosonate cytidylyltransferase Classification: TRANSFERASE Entry date in PDB: 2003-12-30 Resolution [Å]: 1.80 R-Factor: 0.236

CHAIN: A SWISS-PROT/TREMBL: P44490    KEYWORD: Complete proteome    Lipopolysaccharide biosynthesis    Nucleotidyltransferase    Transferase    EC: 2.7.7.38 SCOP: c.68.1.13 Alpha and beta proteins (a/b)    Nucleotide-diphospho-sugar transferases    Nucleotide-diphospho-sugar transferases    Cytidylytransferase    CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase    Haemophilus influenzae GO:  cytoplasm    3-deoxy-manno-octulosonate cytidylyltransferase activity    lipopolysaccharide biosynthesis    CHAIN: B SWISS-PROT/TREMBL: P44490    KEYWORD: Complete proteome    Lipopolysaccharide biosynthesis    Nucleotidyltransferase    Transferase    EC: 2.7.7.38 SCOP: c.68.1.13 Alpha and beta proteins (a/b)    Nucleotide-diphospho-sugar transferases    Nucleotide-diphospho-sugar transferases    Cytidylytransferase    CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase    Haemophilus influenzae GO:  cytoplasm    3-deoxy-manno-octulosonate cytidylyltransferase activity    lipopolysaccharide biosynthesis

Image Source: PDB

Loops in ArchDB95 clusters

1vic_A_183 - EH => SUBCLASS : 0.1.72
1vic_A_44 - EH => SUBCLASS : 2.1.2
1vic_A_123 - EH => SUBCLASS : 4.5.1
1vic_A_93 - EH => SUBCLASS : 8.14.1
1vic_A_206 - HH => SUBCLASS : 2.5.1
1vic_A_193 - HH => SUBCLASS : 4.7.1
1vic_A_52 - HE => SUBCLASS : 1.1.1
1vic_A_216 - HE => SUBCLASS : 2.1.3
1vic_A_29 - HE => SUBCLASS : 3.1.1
1vic_A_106 - HE => SUBCLASS : 3.9.1
1vic_A_133 - HE => SUBCLASS : 4.11.2
1vic_A_75 - HE => SUBCLASS : 6.5.1
1vic_A_23 - HA => SUBCLASS : 2.1.1
1vic_A_143 - HA => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1vic_A_4 - AR
1vic_A_27 - EH
1vic_A_64 - EH
1vic_A_152 - EH
1vic_A_225 - EH
1vic_A_164 - HE

1vh1 A - percentage of sequence identity: 64
1vh1 B - percentage of sequence identity: 64
1vh1 C - percentage of sequence identity: 64
1vh1 D - percentage of sequence identity: 64
1vh3 A - percentage of sequence identity: 100
1vh3 B - percentage of sequence identity: 100
1vh3 C - percentage of sequence identity: 100
1vic A - percentage of sequence identity: 100
1vic B - percentage of sequence identity: 100