PDB: 1wdn Compound: glutamine binding protein Classification: COMPLEX (BINDING PROTEIN/PEPTIDE) Entry date in PDB: 1998-05-06 Resolution [Å]: 1.94 R-Factor: 0.200

CHAIN: A SWISS-PROT/TREMBL: P10344    KEYWORD: 3D-structure    Amino-acid transport    Complete proteome    Periplasmic    Signal    Transport    SCOP: c.94.1.1 Alpha and beta proteins (a/b)    Periplasmic binding protein-like II    Periplasmic binding protein-like II    Phosphate binding protein-like    Glutamine-binding protein    Escherichia coli GO:  periplasmic space (sensu Gram-negative Bacteria)    periplasmic space (sensu Gram-negative Bacteria)    periplasmic space (sensu Gram-negative Bacteria)    transporter activity    transporter activity    transporter activity    transport    transport    transport

Image Source: PDB

Loops in ArchDB40 clusters

1wdn_A_73 - HE => SUBCLASS : 0.1.37
1wdn_A_27 - HE => SUBCLASS : 1.1.2
1wdn_A_139 - HE => SUBCLASS : 4.2.1
1wdn_A_53 - HE => SUBCLASS : 4.2.1
1wdn_A_18 - HA => SUBCLASS : 2.7.1
1wdn_A_43 - EH => SUBCLASS : 1.1.17
1wdn_A_23 - EH => SUBCLASS : 1.2.7
1wdn_A_23 - EH => SUBCLASS : 1.2.12
1wdn_A_43 - EH => SUBCLASS : 1.3.1
1wdn_A_132 - EH => SUBCLASS : 2.1.1
1wdn_A_64 - EH => SUBCLASS : 2.2.5
1wdn_A_111 - EH => SUBCLASS : 3.10.3
1wdn_A_194 - HH => SUBCLASS : 1.3.1

Loops in ArchDB95 clusters

1wdn_A_64 - EH => SUBCLASS : 1.1.8
1wdn_A_43 - EH => SUBCLASS : 1.2.1
1wdn_A_132 - EH => SUBCLASS : 2.1.1
1wdn_A_111 - EH => SUBCLASS : 3.16.1
1wdn_A_194 - HH => SUBCLASS : 1.3.1
1wdn_A_73 - HE => SUBCLASS : 0.1.43
1wdn_A_27 - HE => SUBCLASS : 3.2.1
1wdn_A_27 - HE => SUBCLASS : 3.2.2
1wdn_A_53 - HE => SUBCLASS : 4.2.1
1wdn_A_139 - HE => SUBCLASS : 4.2.1
1wdn_A_18 - HA => SUBCLASS : 2.6.1

Loops not clustered in ArchDB

1wdn_A_5 - AR
1wdn_A_80 - AR
1wdn_A_86 - AR
1wdn_A_153 - EH
1wdn_A_173 - EH
1wdn_A_119 - HE
1wdn_A_158 - HE

1ggg A - percentage of sequence identity: 100
1ggg B - percentage of sequence identity: 100