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Information on 2bbk
PDB: 2bbk
Compound: Methylamine dehydrogenase (madh)
Classification: ELECTRON TRANSPORT
Entry date in PDB: 1994-01-31
Resolution [Å]: 1.75
R-Factor: 0.167


CHAIN: H
SWISS-PROT/TREMBL: P29894
   KEYWORD: 3D-structure    Electron transport    Oxidoreductase    Periplasmic    Signal   
EC: 1.4.99.3
SCOP: b.69.2.1 All beta proteins    7-bladed beta-propeller    YVTN repeat-like/Quinoprotein amine dehydrogenase    Methylamine dehydrogenase, H-chain    Methylamine dehydrogenase, H-chain    Paracoccus denitrificans
GO:  periplasmic space    amine dehydrogenase activity    methylamine metabolism   


CHAIN: L
SWISS-PROT/TREMBL: P22619
   KEYWORD: 3D-structure    Electron transport    Oxidoreductase    Periplasmic    Signal    TTQ   
EC: 1.4.99.3
SCOP: g.21.1.1 Small proteins    Methylamine dehydrogenase, L chain    Methylamine dehydrogenase, L chain    Methylamine dehydrogenase, L chain    Methylamine dehydrogenase    Paracoccus denitrificans
GO:  periplasmic space (sensu Gram-negative Bacteria)    amine dehydrogenase activity    electron transport   


CHAIN: M
SWISS-PROT/TREMBL: P22619
   KEYWORD: 3D-structure    Electron transport    Oxidoreductase    Periplasmic    Signal    TTQ   
EC: 1.4.99.3
SCOP: g.21.1.1 Small proteins    Methylamine dehydrogenase, L chain    Methylamine dehydrogenase, L chain    Methylamine dehydrogenase, L chain    Methylamine dehydrogenase    Paracoccus denitrificans
GO:  periplasmic space (sensu Gram-negative Bacteria)    amine dehydrogenase activity    electron transport   
2bbk Image
Image Source: PDB

Stored Loops of 2bbk

Loops in ArchDB40 clusters

2bbk_H_168 - HA => SUBCLASS : 2.2.1
2bbk_H_137 - HA => SUBCLASS : 3.15.1
2bbk_H_219 - HA => SUBCLASS : 4.1.1
2bbk_H_332 - HA => SUBCLASS : 4.1.1
2bbk_H_235 - HA => SUBCLASS : 4.1.1
2bbk_H_148 - HA => SUBCLASS : 4.1.1
2bbk_H_342 - HA => SUBCLASS : 4.1.2
2bbk_H_46 - HA => SUBCLASS : 4.1.2
2bbk_H_297 - HA => SUBCLASS : 4.1.2
2bbk_H_272 - HA => SUBCLASS : 4.1.4
2bbk_H_178 - HA => SUBCLASS : 4.2.1
2bbk_H_226 - HA => SUBCLASS : 4.4.1
2bbk_H_129 - HA => SUBCLASS : 5.2.1
2bbk_H_322 - HA => SUBCLASS : 6.33.1
2bbk_H_252 - EH => SUBCLASS : 3.18.1
2bbk_H_57 - AR => SUBCLASS : 4.6.1

Loops in ArchDB95 clusters

2bbk_H_252 - EH => SUBCLASS : 3.13.3
2bbk_H_57 - AR => SUBCLASS : 1.1.2
2bbk_H_57 - AR => SUBCLASS : 3.5.2
2bbk_H_168 - HA => SUBCLASS : 2.2.1
2bbk_H_178 - HA => SUBCLASS : 3.1.2
2bbk_H_219 - HA => SUBCLASS : 4.1.1
2bbk_H_332 - HA => SUBCLASS : 4.1.1
2bbk_H_235 - HA => SUBCLASS : 4.1.1
2bbk_H_148 - HA => SUBCLASS : 4.1.1
2bbk_H_297 - HA => SUBCLASS : 4.1.2
2bbk_H_46 - HA => SUBCLASS : 4.1.2
2bbk_H_342 - HA => SUBCLASS : 4.1.2
2bbk_H_272 - HA => SUBCLASS : 4.1.3
2bbk_H_91 - HA => SUBCLASS : 4.1.17
2bbk_H_226 - HA => SUBCLASS : 4.5.1
2bbk_H_137 - HA => SUBCLASS : 4.10.1
2bbk_H_129 - HA => SUBCLASS : 5.2.1
2bbk_H_297 - HA => SUBCLASS : 5.5.1
2bbk_H_322 - HA => SUBCLASS : 5.31.1

Loops in ArchDB-EC clusters

2bbk_H_257 - HE => SUBCLASS : 1.2.13

Loops not clustered in ArchDB

2bbk_L_87 - AR
2bbk_L_119 - AR
2bbk_H_57 - AR
2bbk_H_108 - AR
2bbk_H_200 - AR
2bbk_H_158 - AR
2bbk_H_247 - AR
2bbk_H_264 - AR
2bbk_L_119 - AR
2bbk_H_310 - AR
2bbk_H_353 - AR
2bbk_L_32 - AR
2bbk_L_51 - AR
2bbk_L_68 - AR
2bbk_L_87 - AR
2bbk_L_68 - AR
2bbk_H_264 - AR
2bbk_H_310 - AR
2bbk_H_353 - AR
2bbk_H_158 - AR
2bbk_H_108 - AR
2bbk_H_200 - AR
2bbk_H_247 - AR
2bbk_L_32 - AR
2bbk_L_51 - AR
2bbk_H_272 - HA
2bbk_H_297 - HA
2bbk_H_188 - HA
2bbk_H_322 - HA
2bbk_H_332 - HA
2bbk_H_342 - HA
2bbk_H_79 - HA
2bbk_L_57 - HA
2bbk_H_69 - HA
2bbk_L_57 - HA
2bbk_H_235 - HA
2bbk_H_226 - HA
2bbk_H_33 - HA
2bbk_H_46 - HA
2bbk_H_33 - HA
2bbk_H_69 - HA
2bbk_H_79 - HA
2bbk_H_91 - HA
2bbk_H_129 - HA
2bbk_H_148 - HA
2bbk_H_280 - HA
2bbk_H_168 - HA
2bbk_H_178 - HA
2bbk_H_188 - HA
2bbk_H_137 - HA
2bbk_H_219 - HA
2bbk_H_280 - HA

Homologous structures to 2bbk classified in ArchDB

1mg2 A - percentage of sequence identity: 99
1mg2 E - percentage of sequence identity: 99
1mg2 I - percentage of sequence identity: 99
1mg2 M - percentage of sequence identity: 99
1mg3 A - percentage of sequence identity: 99
1mg3 E - percentage of sequence identity: 99
1mg3 I - percentage of sequence identity: 99
1mg3 M - percentage of sequence identity: 99
2bbk H - percentage of sequence identity: 100
2bbk J - percentage of sequence identity: 100
2mta H - percentage of sequence identity: 99
null nu - percentage of sequence identity: 0