Information on SUBCLASS 8.10.1 |
Subclass Accession number: 8017
Subclass: 8.10.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 38.3 +/- 14.5 Average RMSD (Å) : 0.367 +/- 0.058 Consensus geometry
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Consensus Sequence: | XXCXhCXXGCGh |
(φψ)-conformation: | bbpaFpaalppb |
Pattern: | [KQ] | [QRW] | [TV] | [KNT] | x | [TV] | [C] | [CHR] | [FY] | [C] | x | [TV] | [G] | [C] | [G] | [LVY] | [HIL] | [V] | x | [KTV] |
Conservation: | -0.104 | -0.669 | -0.309 | -0.631 | -0.897 | -0.394 | 1.912 | -0.783 | 0.528 | 1.912 | -1.087 | -0.391 | 0.887 | 1.912 | 0.887 | -0.669 | -0.859 | 0.204 | -0.593 | -0.859 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g8k_A_15 | 1g8k | A | 15 | 34 | QRTNMTCHFCIVGCGYHVYK | EEEEEE-SSBTT--EEEEEE | xbbxbxpaFxaavpxbbbxb |
1h0h_A_11 | 1h0h | A | 11 | 30 | KQTTSVCCYCSVGCGLIVHT | EEEEEE-SSBTT--EEEEEE | xbbbbbpaFxaavpxbbbbb |
2nap_A_7 | 2nap | A | 7 | 26 | KWVKGVCRYCGTGCGVLVGV | EEEEEE-SS-TT--EEEEEE | bbxxbbpaFpaavxxbbxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h0h_A_11 | 1h0h | A | AC5FS4 BINDING SITE FOR CHAIN A | C - 17 |
1h0h_A_11 | 1h0h | A | AC5FS4 BINDING SITE FOR CHAIN A | Y - 19 |
1h0h_A_11 | 1h0h | A | AC5FS4 BINDING SITE FOR CHAIN A | C - 20 |
1h0h_A_11 | 1h0h | A | AC5FS4 BINDING SITE FOR CHAIN A | C - 24 |
Clusters included in this Subclass |
CLUSTER: HA.7.51 |