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Information on SUBCLASS 2.6.8
Subclass Accession number: 8268
Subclass: 2.6.8 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 41.7 +/- 36.0
Average RMSD (Å) : 0.450 +/- 0.058

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXGhXh
(φψ)-conformation: aagpbb
Pattern: [LV][IP][EW]x[FV]xx[G][AM][AN][AG]x[FI][KM][V][LT]
Conservation:0.164-0.8300.164-0.233-0.233-1.123-1.0292.949-0.432-0.6310.612-0.2330.164-0.2331.358-0.432
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j9q_A_1421j9q   A142157VPWHVVSGMNGAIMVLHHHHHTTT-EEEEEEEaaaaaaavxbbbbbbx
1j9q_A_3081j9q   A308323LIEAFELGAAAHFKVTHHHHHTSS-EEEEEEEaaaaaaagxbbbbbbx
1nif_*_1421nif   -142157VPWHVTSGMNGAIMVLHHHHHTTT-EEEEEEEaaaaaaavxbbbbbbx
1nif_*_3081nif   -308323LIEAFELGAAGHFKVTHHHHHTTS-EEEEEEEaaaaaaagxbbbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j9q_A_1421j9q   A     NO2NITRITE ION V - 142
1j9q_A_1421j9q   A     CUCOPPER (II) ION H - 145
1j9q_A_1421j9q   A     CUCOPPER (II) ION M - 150
1j9q_A_3081j9q   A     CUCOPPER (II) ION L - 308
1j9q_A_3081j9q   A     NO2NITRITE ION L - 308
1j9q_A_3081j9q   A     NO2NITRITE ION F - 312

Clusters included in this Subclass
CLUSTER: HE.4.194