Information on SUBCLASS 5.3.3 |
Subclass Accession number: 712
Subclass: 5.3.3 ![]() Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation EC : 1 (>50 %) 3 (>50 %) 5 (>50 %) GO : GO:0003676 (>50 %) GO:0003677 (>50 %) GO:0004407 (>50 %) GO:0016810 (>50 %) GO:0016811 (>50 %) GO:0017136 (>50 %) GO:0019213 (>50 %) SCOP : 52466 (>50 %) 52467 (>50 %) 63984 (>50 %) |
Number of loops: 10 Average sequence ID (%) : 11.5 +/- 12.9 Average RMSD (Å) : 0.910 +/- 0.281 Consensus geometry
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Consensus Sequence: | XXXXXcpXX |
(φψ)-conformation: | bbpaalpbb |
Pattern: | x | x | x | x | x | x | x | x | [aden] | [DGN] | x | [adegpst] | x | x | [AGKV] | x |
Conservation: | -0.267 | -0.118 | 0.127 | -0.583 | -1.238 | -0.533 | 0.403 | -0.436 | 0.432 | 3.352 | 0.066 | -0.510 | -0.134 | -0.592 | 0.422 | -0.393 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ehi_A_298 | 1ehi | A | 301 | 316 | RMDFLLDENNVPYLGE | EEEEEE-TT--EEEEE | bbbbbbxaavxwbxab |
1fc6_A_399 | 1fc6 | A | 400 | 415 | IQTVVDLSDGSGVAVT | EEEEEE-TTS-EEEEE | bbbbxxbaavxbbxbx |
1fjr_A_36 | 1fjr | A | 38 | 53 | EYDFRILPDDSKQKVA | EEEEEE-TTS-EEEEE | xbabbxbaavxbbxbp |
1fzd_A_704 | 1fzd | A | 705 | 720 | LRVELEDWAGNEAYAE | EEEEEE-TTS-EEEEE | xbbbbbxaavxbbbbb |
1i1n_A_189 | 1i1n | A | 191 | 206 | LEQYDKLQDGSIKMKP | EEEEEE-TTS-EEEEE | xbbbbbxaavxbbbbx |
1io1_A_304 | 1io1 | A | 307 | 322 | VKMSYTDNNGKTIDGG | EEEEEE-TTS-EEEEE | bbxbbbxaavxbbxbx |
1jlr_A_83 | 1jlr | A | 84 | 99 | QKKEVTTPLDVSYHGV | EEEEEE-TTS-EEEEE | bxbbbbxaavbxbxbb |
1m4l_A_33 | 1m4l | A | 35 | 50 | KLQIGRSYEGRPIYVL | EEEEEE-TTS-EEEEE | bbbaebxaavxxbbbx |
1p1j_A_114 | 1p1j | A | 114 | 129 | TLKLGIDAEGNDVYAP | EEEEEE-TTS-EEEEE | bbxaebxaavbpbbbp |
1rvk_A_11 | 1rvk | A | 14 | 29 | TTRRHSDSAGHAHPGP | EEEEEE-TTS-EEEEE | xbaxbbxaavxxbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.4.43 |