Information on SUBCLASS 3.6.2 |
Subclass Accession number: 3803
Subclass: 3.6.2 ![]() Type: AR beta-beta link DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 9 Average sequence ID (%) : 15.8 +/- 17.3 Average RMSD (Å) : 0.689 +/- 0.237 Consensus geometry
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Consensus Sequence: | XhXXcpX |
(φψ)-conformation: | bbpplbp |
Pattern: | x | [ILTV] | [egnpq] | [adpsv] | [agn] | x | [dptv] | [afivy] | x | [ilt] |
Conservation: | -0.765 | 1.680 | -0.584 | -0.756 | 1.414 | -0.734 | 0.180 | -0.034 | -1.208 | 0.807 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dgw_A_137 | 1dgw | A | 139 | 148 | KIQAGTPFYL | EE-TT--EEE | xbppvxwbbb |
1gtt_A_257 | 1gtt | A | 257 | 266 | LTGDNQTSVR | EE-TTEEEEE | xbxxlbbbxx |
1hfu_A_374 | 1hfu | A | 376 | 385 | ELPRNQVVEL | EE-SS-EEEE | xbxxlbxbbb |
1j1l_A_210 | 1j1l | A | 211 | 220 | KIEPHHTAVL | EE-TTEEEEE | xbxpvbbbxx |
1kv7_A_280 | 1kv7 | A | 286 | 295 | EVNDNKPFDL | EE-TT--EEE | xbbpvbwbbx |
1kya_A_371 | 1kya | A | 373 | 382 | SLPSNADIEI | EE-SS-EEEE | xbxxlbxbbb |
1od5_A_121 | 1od5 | A | 124 | 133 | VIPPGVPYWT | EE-TT--EEE | bbxpvbwbbb |
1ule_A_2 | 1ule | A | 4 | 13 | HLFVNNQVKL | EE-TTEEEEE | bxxxlbbbxx |
2phl_A_299 | 2phl | A | 301 | 310 | VIPAAYPVAI | EE-TT--EEE | xbxxvxwbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hfu_A_374 | 1hfu | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 375 |
1kya_A_371 | 1kya | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 381 |
1kya_A_371 | 1kya | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 383 |
1od5_A_121 | 1od5 | A | CO3CARBONATE ION | Y - 131 |
1od5_A_121 | 1od5 | A | CO3CARBONATE ION | W - 132 |
1od5_A_121 | 1od5 | A | CO3CARBONATE ION | T - 133 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1od5_A_121 | 1od5 | A | AC1CO3 BINDING SITE FOR CHAIN A | Y - 131 |
1od5_A_121 | 1od5 | A | AC1CO3 BINDING SITE FOR CHAIN A | T - 133 |
Clusters included in this Subclass |
CLUSTER: AR.4.72 |
CLUSTER: AR.6.117 |