Information on SUBCLASS 5.37.1 |
Subclass Accession number: 4929
Subclass: 5.37.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 53954 (>75 %) 53955 (>75 %) 53960 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 47.8 +/- 10.1 Average RMSD (Å) : 0.400 +/- 0.100 Consensus geometry
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Consensus Sequence: | XpXhDhWXh |
(φψ)-conformation: | aaeaaapaa |
Pattern: | [T] | x | [AD] | x | [KMT] | [C] | [A] | [K] | [K] | [I] | [LY] | [DK] | x | [HKT] | [GKR] | [FI] | [D] | [AY] | [W] | x | [AG] | [HW] | [DK] |
Conservation: | 0.649 | -1.077 | -0.672 | -0.871 | -0.830 | 2.127 | 0.279 | 0.649 | 0.649 | 0.279 | -0.271 | -0.371 | -0.872 | -0.789 | -0.707 | -0.208 | 1.018 | -0.603 | 2.867 | -0.995 | -0.208 | 0.301 | -0.343 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1alc_*_86 | 1alc | - | 86 | 108 | TDDIMCAKKILDIKGIDYWIAHK | HHHHHHHHHHHHHT-GGGSHHHH | aaaaaaaaaaaaaaeaaaxaaaa |
1gd6_A_84 | 1gd6 | A | 84 | 106 | TKAAKCAKKIYKRHRFDAWYGWK | HHHHHHHHHHHHHHGGGG-HHHH | aaaaaaaaaaaaaaeaaabaaaa |
1iiz_A_85 | 1iiz | A | 85 | 107 | TVASTCAKKIYKRTKFDAWSGWD | HHHHHHHHHHHHHHTTTT-HHHH | aaaaaaaaaaaaaaeaaaxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1alc_*_86 | 1alc | * | CACALCIUM ION | T - 86 |
1alc_*_86 | 1alc | * | CACALCIUM ION | D - 87 |
1alc_*_86 | 1alc | * | CACALCIUM ION | D - 88 |
Clusters included in this Subclass |
CLUSTER: HH.5.293 |