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| Information on SUBCLASS 2.2.39 |
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Subclass Accession number: 6084
Subclass: 2.2.39 
Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: 
 Consensus coordinates:
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Number of loops: 3 Average sequence ID (%) : 21.4 +/- 25.7 Average RMSD (Å) : 0.533 +/- 0.153 Consensus geometry
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| Consensus Sequence: | hGpppX |
| (φψ)-conformation: | bbaabb |
| Pattern: | [FL] | [DH] | [FL] | [G] | [RST] | [KQR] | [HNS] | x | [GSV] | [VW] | [AEQ] | [IV] | x | x |
| Conservation: | 0.116 | 0.756 | 0.116 | 2.477 | -0.584 | 0.218 | -0.001 | -0.794 | -1.167 | 0.638 | -0.438 | 0.851 | -1.385 | -0.802 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1nu0_A_8 | 1nu0 | A | 8 | 21 | FDFGTKSIGVAVGQ | EE--SSEEEEEEEE | bbxbaabbxbbbbb |
| 1vh5_A_97 | 1vh5 | A | 105 | 118 | LHLGSRHQVWQIEI | EEE-SSEEEEEEEE | abbxaabbbbbbbb |
| 1vh9_A_97 | 1vh9 | A | 105 | 118 | LHLGRQNQSWEIVV | EEE-SSEEEEEEEE | abbbaabbbbbbbb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1nu0_A_8 | 1nu0 | A | MSESELENOMETHIONINE | F - 8 |
| 1nu0_A_8 | 1nu0 | A | MSESELENOMETHIONINE | V - 17 |
| 1nu0_A_8 | 1nu0 | A | MSESELENOMETHIONINE | A - 18 |
| 1nu0_A_8 | 1nu0 | A | MSESELENOMETHIONINE | V - 19 |
| 1nu0_A_8 | 1nu0 | A | MSESELENOMETHIONINE | G - 20 |
| 1nu0_A_8 | 1nu0 | A | MSESELENOMETHIONINE | Q - 21 |
| Clusters included in this Subclass |
| CLUSTER: HA.3.217 |
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