Information on SUBCLASS 5.13.2 |
Subclass Accession number: 6391
Subclass: 5.13.2 ![]() Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 3 Average sequence ID (%) : 7.2 +/- 11.5 Average RMSD (Å) : 0.933 +/- 0.379 Consensus geometry
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Consensus Sequence: | XhcpcXhXX |
(φψ)-conformation: | bbeapppbp |
Pattern: | [EGS] | [IMW] | [TVY] | x | [GT] | x | [ALY] | [AKS] | [AV] | [DG] | [ES] | [DG] | [DPT] | [FIV] | [HKM] | [GKS] | [FMT] | x | x | x | [FGI] | [GIL] | [ALW] |
Conservation: | -0.135 | 0.304 | -0.281 | -1.011 | 1.333 | -0.281 | -0.719 | 0.158 | 1.129 | 1.966 | 1.289 | 1.966 | 0.012 | 0.888 | -0.281 | -0.135 | -0.281 | -1.157 | -0.427 | -0.719 | -1.450 | -1.450 | -0.719 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gy6_A_81 | 1gy6 | A | 83 | 105 | SMVVGQLKADEDPIMGFHQMFLL | EEEEEEEEETTS--EEEEEEEEE | bbbbbbbbbeaxxxbxbbbbbbb |
1nb0_A_52 | 1nb0 | A | 52 | 74 | GIYYGWASVGSGDVHKMVVSIGW | EEEEEEEEETT---EEEEEEEEE | ebbbebbbbeaxxxbxbbbbbbx |
1oew_A_195 | 1oew | A | 195 | 217 | EWTSTGYAVGSGTFKSTSIDGIA | EEEEEEEEETTS--EEEEEEEEE | xbbxaebbbeaxxxbxbxbxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1oew_A_195 | 1oew | A | SERSERINE | I - 216 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oew_A_195 | 1oew | A | AC1SER BINDING SITE FOR CHAIN A | I - 216 |
Clusters included in this Subclass |
CLUSTER: HA.4.221 |