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Information on SUBCLASS 8.5.1
Subclass Accession number: 3481
Subclass: 8.5.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 56.1 +/- 24.8
Average RMSD (Å) : 0.400 +/- 0.231

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: WNGPhGVFEhXX
(φψ)-conformation: bbepabpaabaa
Pattern: x[aiv][fiv][w][n][g][p][mpv][g][v][f][e][fimvw]xx[fy][ads]x[g][t][fkl][aq][ilv][aglm]x[ae][ilmv][agv]
Conservation:-0.911-0.439-0.4042.9261.0531.0531.427-0.6551.0530.3031.0530.678-0.787-0.954-0.9770.609-0.685-0.8241.0530.678-0.968-0.428-0.181-1.026-0.995-0.524-0.315-0.814
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
16pk_*_33416pk   -334361SAIWNGPMGVFEMVPYSKGTFAIAKAMGEEEEES-SS-TTSGGG-HHHHHHHHHHHbbbbbMxabxaabaaaaaaaaaaaaaaa
1hdi_A_3321hdi   A332359QIVWNGPVGVFEWEAFAQGTKALMDEVVEEEEES-SS-TTSGGG-HHHHHHHHHHHbbbbbepabxaabaaaaaaaaaaaaaaa
1php_*_3121php   -312339LVVWNGPMGVFEMDAFAHGTKAIAEALAEEEEES-SS-TTSGGG-HHHHHHHHHHHbbbbbepabxaabaaaaaaaaaaaaaaa
1qpg_*_3301qpg   -330357TIVWNGPPGVFEFEKFAAGTKALLDEVVEEEEES-SS-TTSGGG-HHHHHHHHHHHbbbbbexabxaabaaaaaaaaaaaaaaa
1v6s_A_3091v6s   A309336TVFWNGPMGVFEVPPFDEGTLAVGQAIAEEEEES-SS-TTSTTTTHHHHHHHHHHHbbbbbexabxaabwwaaaaaaaaaaaaa
1vjd_A_3321vjd   A332359QIVWNGPVGVFEWEAFAQGTKALMDEVVEEEEES-SS-TTSGGGTHHHHHHHHHHHbbbbbexabxaabaaaaaaaaaaaaaaa
1vpe_*_3131vpe   -313340TVVWNGPMGVFEIDDFAEGTKQVALAIAEEEEES-SS-TTSGGG-HHHHHHHHHHHbbbbbexabxaaxaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
16pk_*_33416pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER N - 338
16pk_*_33416pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER G - 339
16pk_*_33416pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER P - 340
16pk_*_33416pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER M - 341
16pk_*_33416pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER G - 342
16pk_*_33416pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER V - 343
16pk_*_33416pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER F - 344
16pk_*_33416pk   *     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID F - 344
16pk_*_33416pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER E - 345
16pk_*_33416pk   *     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID E - 345
16pk_*_33416pk   *     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID M - 346
16pk_*_33416pk   *     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID V - 347
16pk_*_33416pk   *     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID P - 348
16pk_*_33416pk   *     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID S - 350
1hdi_A_3321hdi   A     AMPADENOSINE MONOPHOSPHATE P - 338
1hdi_A_3321hdi   A     AMPADENOSINE MONOPHOSPHATE V - 339
1hdi_A_3321hdi   A     AMPADENOSINE MONOPHOSPHATE G - 340
1hdi_A_3321hdi   A     AMPADENOSINE MONOPHOSPHATE V - 341
1hdi_A_3321hdi   A     AMPADENOSINE MONOPHOSPHATE F - 342
1hdi_A_3321hdi   A     AMPADENOSINE MONOPHOSPHATE E - 343
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE N - 316
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE G - 317
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE P - 318
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE M - 319
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE G - 320
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE V - 321
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE F - 322
1php_*_3121php   *     ADPADENOSINE-5'-DIPHOSPHATE E - 323
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE N - 334
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 335
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE P - 336
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE P - 337
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 338
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE V - 339
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE F - 340
1qpg_*_3301qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE E - 341
1vjd_A_3321vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE W - 335
1vjd_A_3321vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE N - 336
1vjd_A_3321vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE G - 337
1vjd_A_3321vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE P - 338
1vjd_A_3321vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE V - 339
1vjd_A_3321vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE G - 340
1vjd_A_3321vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE V - 341
1vjd_A_3321vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE F - 342
1vjd_A_3321vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE E - 343
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER N - 317
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 318
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER P - 319
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER M - 320
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 321
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER V - 322
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER F - 323
1vpe_*_3131vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER E - 324
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hdi_A_3321hdi   A AMPAMP BINDING SITEG - 340

Clusters included in this Subclass
CLUSTER: EH.11.4