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Information on SUBCLASS 5.9.2
Subclass Accession number: 730
Subclass: 5.9.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>50 %)  3.2.1 (>50 %)  3.2.1.1
GO : GO:0004553 (>75 %)  GO:0005509 (>50 %)  GO:0016160 (>75 %)  GO:0016798 (>75 %)  
SCOP : 51010 (>75 %)  51011 (>75 %)  51012 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 15.6 +/- 17.9
Average RMSD (Å) : 0.740 +/- 0.261

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: hXXccXpph
(φψ)-conformation: bpaabaabb
Pattern: [IV]x[afi]xxx[GNSV][DKN][DN][kpt][EGKNT]x[AFLV]xx[knr]
Conservation:2.280-0.842-0.783-0.405-0.217-1.036-0.3460.9302.224-0.419-0.3510.326-0.015-0.309-0.853-0.183
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1mve_A_561mve   A5772VDIEVLGKNPGSFQSNEEEEEETT-TTEEEEEbbbbxxaabaabbxxb
1o7n_B_6151o7n   B623638VQAAMDVNDKELLHIREEEEE-SS-TTEEEEExbbbxxaabaabbxbb
1p32_A_1681p32   A169184VVEVIKNDDGKKALVLEEEEEEGGGTTEEEEEbbbbbxaabaabbxbb
1qxm_A_141qxm   A1429VFFISPSNNTNKVLDKEEEEEETT-TTEEEEEbbbbbxaabaabbxbx
2ayh_*_1042ayh   -106121IDIEFLGKDTTKVQFNEEEEEETT-TTEEEEEbbbbbxaabaabbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mve_A_561mve   A     MSESELENOMETHIONINE V - 57
1mve_A_561mve   A     MSESELENOMETHIONINE D - 58
1mve_A_561mve   A     MSESELENOMETHIONINE I - 59
1mve_A_561mve   A     CACALCIUM ION I - 59
1mve_A_561mve   A     MSESELENOMETHIONINE E - 60
1mve_A_561mve   A     MSESELENOMETHIONINE V - 61
1mve_A_561mve   A     CACALCIUM ION V - 61
1o7n_B_6151o7n   B     EDO1,2-ETHANEDIOL R - 615
1o7n_B_6151o7n   B     EDO1,2-ETHANEDIOL F - 616
1qxm_A_141qxm   A     EDO1,2-ETHANEDIOL D - 28
1qxm_A_141qxm   A     EDO1,2-ETHANEDIOL K - 29
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o7n_B_6151o7n   B AC3EDO BINDING SITE FOR CHAIN GR - 638

Clusters included in this Subclass
CLUSTER: HA.4.69
CLUSTER: HA.5.61