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PDB code:

Information on SUBCLASS 4.51.2

Subclass Accession number: 8525 Subclass: 4.51.2 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates:

Number of loops: 3 Average sequence ID (%) : 3.3 +/- 6.8 Average RMSD (Å) : 0.800 +/- 0.173 Consensus geometry d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 45-90

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bte_A_18	1bte	A	18	27	WERDRTNQTG	HHHHTS-SEE	aaaavbxabe
1dmh_A_207	1dmh	A	212	221	LNQLGRHGNR	HHHTT---EE	aaaavbxabb
1omz_A_245	1omz	A	254	263	TRHTGKPSGI	HHHHSS-SEE	aaaavbpabb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	N - 24
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	T - 26
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	G - 27
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	V - 28
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	E - 29
1bte_A_18	1bte	A	NAGN-ACETYL-D-GLUCOSAMINE	P - 30
1dmh_A_207	1dmh	A	LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE	Q - 210
1dmh_A_207	1dmh	A	LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE	L - 211
1dmh_A_207	1dmh	A	LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE	Q - 214
1dmh_A_207	1dmh	A	FEFE (III) ION	R - 221
1dmh_A_207	1dmh	A	MCT4-METHYLCATECHOL	R - 221
1omz_A_245	1omz	A	UD2URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE	D - 245
1omz_A_245	1omz	A	UD2URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE	D - 246
1omz_A_245	1omz	A	EDO1,2-ETHANEDIOL	K - 259
1omz_A_245	1omz	A	EDO1,2-ETHANEDIOL	P - 260
1omz_A_245	1omz	A	EDO1,2-ETHANEDIOL	G - 262
1omz_A_245	1omz	A	EDO1,2-ETHANEDIOL	I - 263

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1bte_A_18	1bte	A	NAGGLYCOSYLATION SITE	N - 24

Clusters included in this Subclass

CLUSTER: HE.4.229

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