Information on SUBCLASS 3.4.5 |
Subclass Accession number: 4697
Subclass: 3.4.5 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 13.0 +/- 15.4 Average RMSD (Å) : 0.730 +/- 0.389 Consensus geometry
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Consensus Sequence: | XXXXXhX |
(φψ)-conformation: | aalbpaa |
Pattern: | [afglmvwy] | x | [aegqst] | x | [AEGR] | [aekqr] | x | x | [egknr] | x | [KPT] | [flpv] | x | [AEKNQ] | [aflmvy] |
Conservation: | -0.715 | -0.704 | -0.115 | -0.863 | 1.421 | 0.678 | -0.599 | -1.072 | 0.199 | -0.337 | 2.309 | -0.542 | -0.772 | 1.348 | -0.236 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1au7_A_6 | 1au7 | A | 16 | 30 | FKVRRIKLGYTQTNV | HHHHHHHHT--HHHH | aaaaaaaagbbaaaa |
1ci9_A_184 | 1ci9 | A | 189 | 203 | GAVVERATGQPLAAA | HHHHHHHHTS-HHHH | aaaaaaaavbxaaaa |
1cp2_A_212 | 1cp2 | A | 213 | 227 | MVTKAEINKQTVIEY | HHHHHHHTTS-HHHH | aaaaaaaalbxaaaa |
1f2v_A_104 | 1f2v | A | 105 | 119 | TPALAAEIGNTRSAA | HHHHHHHHTS-HHHH | aaaaaaaavbxaaaa |
1fp6_A_216 | 1fp6 | A | 216 | 230 | VVQRAEIRRMTVIEY | HHHHHHTTTS-HHHH | aaaaaaaalbxaaaa |
1jpm_A_97 | 1jpm | A | 108 | 122 | YDGWAQMCGLPLYQM | HHHHHHHTTSBHHHH | aaaaaaaavbxaaaa |
1muc_A_102 | 1muc | A | 113 | 127 | LDAQGKRLGLPVSEL | HHHHHHHHT-BHHHH | aaaaaaaavbxaaaa |
1nvt_A_160 | 1nvt | A | 167 | 181 | AKEIAEKLNKKFGEE | HHHHHHHHT--HHHH | aaaaaaaalbxaaaa |
1pjr_*_141 | 1pjr | - | 147 | 161 | TISAAKNELLPPEQF | HHHHHHHTT--HHHH | aaaaaaaalbxaaaa |
2mnr_*_98 | 2mnr | - | 112 | 126 | WDALGKVHETPLVKL | HHHHHHHTTSBHHHH | aaaaaaaalbwaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fp6_A_216 | 1fp6 | A | ADPADENOSINE-5'-DIPHOSPHATE | V - 217 |
1fp6_A_216 | 1fp6 | A | ADPADENOSINE-5'-DIPHOSPHATE | Q - 218 |
1fp6_A_216 | 1fp6 | A | ADPADENOSINE-5'-DIPHOSPHATE | E - 221 |
1jpm_A_97 | 1jpm | A | GOLGLYCEROL | D - 109 |
1jpm_A_97 | 1jpm | A | GOLGLYCEROL | Q - 113 |
1nvt_A_160 | 1nvt | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | K - 162 |
Clusters included in this Subclass |
CLUSTER: HH.3.107 |
CLUSTER: HH.4.104 |