ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 1.7.1

Subclass Accession number: 1040
Subclass: 1.7.1

Type: EH beta-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 4.1 (>50 %)
GO : GO:0016829 (>50 %)  GO:0016829 (>50 %)  GO:0016830 (>50 %)
SCOP : 52171 (>50 %)  52317 (>50 %)  52318 (>50 %)

Number of loops: 3

Average sequence ID (%) : 16.7 +/- 16.9
Average RMSD (Å) : 0.633 +/- 0.231

Consensus geometry

d (Å): 3

delta (°): 45-90

theta (°): 90-135

rho (°): 45-90

Consensus Sequence:	XXhhG
(φψ)-conformation:	bbGaa

Pattern:	[IV]	[ITW]	[GT]	[FIT]	[CG]	[LV]	[G]	[EFH]	x	[AES]	[AIL]	x	x	[AGL]
Conservation:	1.109	-0.605	0.216	-0.534	0.785	0.505	2.690	-0.390	-0.605	-0.247	-0.319	-0.749	-0.964	-0.892

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1i7q_B_81	1i7q	B	81	94	IIGICLGHQAIVEA	EEEETHHHHHHHHH	bbbbGaaaaaaaaa
1l9x_A_106	1l9x	A	106	119	VWGTCLGFEELSLL	EEEETHHHHHHHHH	bbbbGaaaaaaaaa
1pvd_A_68	1pvd	A	71	84	ITTFGVGELSALNG	EEETTHHHHHHHHH	bbbpGaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1i7q_B_81	1i7q	B	ILGGLUTAMYL GROUP	I - 84
1i7q_B_81	1i7q	B	ILGGLUTAMYL GROUP	C - 85
1i7q_B_81	1i7q	B	ILGGLUTAMYL GROUP	L - 86
1i7q_B_81	1i7q	B	ILGGLUTAMYL GROUP	G - 87
1i7q_B_81	1i7q	B	ILGGLUTAMYL GROUP	Q - 89
1pvd_A_68	1pvd	A	TPPTHIAMINE DIPHOSPHATE	T - 73
1pvd_A_68	1pvd	A	TPPTHIAMINE DIPHOSPHATE	V - 76
1pvd_A_68	1pvd	A	TPPTHIAMINE DIPHOSPHATE	G - 77
1pvd_A_68	1pvd	A	TPPTHIAMINE DIPHOSPHATE	S - 80
1pvd_A_68	1pvd	A	TPPTHIAMINE DIPHOSPHATE	N - 83

Clusters included in this Subclass

CLUSTER: EH.1.103