Logo
Information on SUBCLASS 3.7.8
Subclass Accession number: 1185
Subclass: 3.7.8 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 9.5 +/- 10.3
Average RMSD (Å) : 1.067 +/- 0.252

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXXXXXX
(φψ)-conformation: bbpabaa
Pattern: [FIT][GVY]xxxx[AD][PT]xx[GPQ][QS]x[IL]
Conservation:-0.230-0.852-0.749-0.6450.082-1.0600.8971.777-0.852-0.541-0.3331.318-0.5411.729
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c7k_A_21c7k   A518TYDPSNAPSFQQEIEEEEEE-GGGHHHHbbbaaabaaaaaaa
1of8_A_1551of8   A155168IGSEMLDTISPQYLEEEE--SSSTHHHHbbbxxaxaaaaaaa
8abp_*_608abp   -6174FVICTPDPKLGSAIEEEE-S-GGGHHHHbxbbxabaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c7k_A_21c7k   A     CACALCIUM ION E - 17
1c7k_A_21c7k   A     CACALCIUM ION N - 20
1of8_A_1551of8   A     PEPPHOSPHOENOLPYRUVATE E - 158
1of8_A_1551of8   A     G3P3-PHOSPHOGLYCEROL E - 158
1of8_A_1551of8   A     GOLGLYCEROL L - 160
1of8_A_1551of8   A     GOLGLYCEROL D - 161
8abp_*_608abp   *     GLAALPHA D-GALACTOSE C - 64
8abp_*_608abp   *     GLBBETA-D-GALACTOSE C - 64
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1of8_A_1551of8   A AC2PEP BINDING SITE FOR CHAIN AE - 158
1of8_A_1551of8   A AC5GOL BINDING SITE FOR CHAIN BD - 161

Clusters included in this Subclass
CLUSTER: EH.5.275