Information on SUBCLASS 3.9.1 |
Subclass Accession number: 1195
Subclass: 3.9.1 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 9.5 +/- 14.0 Average RMSD (Å) : 0.929 +/- 0.160 Consensus geometry
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Consensus Sequence: | hXXXpXp |
(φψ)-conformation: | bpaabaa |
Pattern: | [gitv] | x | x | [AFIVY] | [dpqst] | x | x | [DHQS] | x | [ADER] | x | [alpvy] | x | [aekl] |
Conservation: | -0.103 | -0.550 | 0.042 | 1.183 | -0.161 | -0.841 | -0.693 | 1.892 | -0.660 | 2.123 | -0.591 | -0.842 | -0.694 | -0.106 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dp4_A_182 | 1dp4 | A | 185 | 198 | HQEFVEGDPDHYPK | EEEE-TT-GGGHHH | bbxbbaabaaaaaa |
1f6b_A_95 | 1f6b | A | 97 | 110 | VFLVDCADHERLLE | EEEEETT-GGGHHH | bbxbxaabaaaaaa |
1gs5_A_232 | 1gs5 | A | 232 | 245 | VDIASWRHAEQLPA | EEEEESS-GGGHHH | bbbbxaabaaaaaa |
1k87_A_399 | 1k87 | A | 400 | 413 | GFVIQAYQKRCPLV | EEEEETTBTTHHHH | bbxbxaaxaaaaaa |
1r8s_A_87 | 1r8s | A | 89 | 102 | IFVVDSNDRERVNE | EEEEETT-GGGHHH | bbbbxaaxaaaaaa |
1rlr_*_302 | 1rlr | - | 303 | 316 | TLFYPMWHLEVESL | EEEEETTBTTHHHH | bbbbpaaxaaaaaa |
1vhc_A_43 | 1vhc | A | 43 | 56 | VAEITFRSEAAADA | EEEEETTSTTHHHH | bbbxxaabaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f6b_A_95 | 1f6b | A | GDPGUANOSINE-5'-DIPHOSPHATE | L - 99 |
1f6b_A_95 | 1f6b | A | GDPGUANOSINE-5'-DIPHOSPHATE | D - 101 |
1k87_A_399 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 402 |
1k87_A_399 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Q - 404 |
1k87_A_399 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 406 |
1r8s_A_87 | 1r8s | A | GDPGUANOSINE-5'-DIPHOSPHATE | V - 91 |
1r8s_A_87 | 1r8s | A | FMTFORMIC ACID | L - 111 |
Clusters included in this Subclass |
CLUSTER: EH.5.102 |
CLUSTER: EH.7.49 |