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Information on SUBCLASS 4.16.2
Subclass Accession number: 1286
Subclass: 4.16.2 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0003995 (>75 %)  GO:0016627 (>75 %)  
SCOP : 47203 (>75 %)  47204 (>75 %)  47363 (>75 %)  
 Number of loops: 7

Average sequence ID (%) : 12.3 +/- 14.5
Average RMSD (Å) : 0.929 +/- 0.250

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hXXXXpXX
(φψ)-conformation: bbapapaa
Pattern: x[ailvy]x[DGPT]xx[DNS][eprs][ADV][ADGQT][afiv]x
Conservation:-0.3180.231-0.7070.333-1.008-0.7352.720-0.0880.725-0.023-0.328-0.799
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cfy_A_381cfy   A4354ETSTDPSYDAFLEEE----HHHHHbbbaxaxaaaaa
1dc1_A_2351dc1   A240251ELKGGIDPAGADEEE----HHHHHbbbaxaxaaaaa
1jbw_A_3101jbw   A311322VIDGAHNPDGINEEE---SHHHHHbbbaxNbaaaaa
1jet_A_2201jet   A222233TYLPISSEVTDVEEE----HHHHHbbbaxaxaaaaa
1km4_A_151km4   A1728LAMDLMNRDDALEEE--SSHHHHHxxxaxabaaaaa
1mdb_A_2521mdb   A254265VLSPSPSPDDAFEE-SSSSHHHHHbxxabapaaaaa
1un8_A_2261un8   A226237SVIDTQNSAQVVEEES---HHHHHbbxabapaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER D - 313
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER G - 314
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER A - 315
1jbw_A_3101jbw   A     MGMAGNESIUM ION H - 316
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER H - 316
1jbw_A_3101jbw   A     MGMAGNESIUM ION N - 317
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER N - 317
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER D - 319
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER G - 320
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER I - 321
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER G - 323
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER L - 324
1jet_A_2201jet   A     IUMURANYL (VI) ION V - 230
1km4_A_151km4   A     UURIDINE-5'-MONOPHOSPHATE A - 18
1km4_A_151km4   A     UURIDINE-5'-MONOPHOSPHATE D - 20

Clusters included in this Subclass
CLUSTER: EH.3.105
CLUSTER: EH.4.108
CLUSTER: EH.5.47