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Information on SUBCLASS 0.1.14
Subclass Accession number: 14
Subclass: 0.1.14 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0046914 (>75 %)  
SCOP : 53473 (>75 %)  53474 (>75 %)  
 Number of loops: 8

Average sequence ID (%) : 13.2 +/- 13.3
Average RMSD (Å) : 0.562 +/- 0.160

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pXhX
(φψ)-conformation: aaba
Pattern: xx[AGILT]x[agikv][filtvy][agqs]xx[HY][CHQRS][DER]x[ilv]x[AGKQRS][ALMTV][AILTV][afilmv]x
Conservation:-0.761-0.409-0.423-0.648-0.532-0.303-0.047-0.839-0.4643.396-0.1101.666-0.2780.633-0.892-0.0680.1800.650-0.261-0.489
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ehy_A_1081ehy   A111130IVLHKFIRKYSDRVIKAAIFHHHHHHHHHTGGGEEEEEEEaaaaaaaaaaaaababbbbb
1iup_A_1041iup   A107126GLAIATALRYSERVDRMVLMHHHHHHHHHSGGGEEEEEEEaaaaaaaaaaaaabFxbbbb
1j1i_A_1141j1i   A118137ATGLGVSVLHSELVNALVLMHHHHHHHHH-GGGEEEEEEEaaaaaaaaaaaaababbbbb
1mtz_A_1061mtz   A109128ALALAYAVKYQDHLKGLIVSHHHHHHHHHHGGGEEEEEEEaaaaaaaaaaaaababbbbb
1o9g_A_641o9g   A6483YLLTVLGLLHRRSLRQVIASHHHHHHHHHTGGGEEEEEEEaaaaaaaaaaaaababbbbb
1q0r_A_1031q0r   A106125TITQVIALDHHDRLSSLTMLHHHHHHHHH-GGGEEEEEEEaaaaaaaaaaaaababbbbb
1q5y_A_651q5y   A6988SRIVSTQHHHHDLSVATLHVHHHHHHHHHTGGGEEEEEEEaaaaaaaaaaaaaxabbxbb
1qj4_A_821qj4   A84103LNIAIAADKYCEKIAAAVFHHHHHHHHHHHGGGEEEEEEEaaaaaaaaaaaaababbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1iup_A_1041iup   A     ISBISOBUTYRIC ACID F - 104
1iup_A_1041iup   A     ISBISOBUTYRIC ACID G - 105
1o9g_A_641o9g   A     MSESELENOMETHIONINE L - 72
1q0r_A_1031q0r   A     AKT10-DECARBOXYMETHYLACLACINOMYCIN T (DCMAT) M - 103
1q0r_A_1031q0r   A     AKT10-DECARBOXYMETHYLACLACINOMYCIN T (DCMAT) T - 106
1q5y_A_651q5y   A     EGLETHYLENE GLYCOL R - 65
1q5y_A_651q5y   A     NINICKEL (II) ION V - 72
1q5y_A_651q5y   A     NINICKEL (II) ION H - 76
1q5y_A_651q5y   A     NINICKEL (II) ION H - 87
1q5y_A_651q5y   A     NINICKEL (II) ION V - 88
1q5y_A_651q5y   A     NINICKEL (II) ION H - 89
1qj4_A_821qj4   A     GOLGLYCEROL G - 82

Clusters included in this Subclass
CLUSTER: HE.3.94
CLUSTER: HE.4.77
CLUSTER: HE.5.32